Gene Bcen_6416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6416 
Symbol 
ID4096364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp1042080 
End bp1042964 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content72% 
IMG OID638019703 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_626250 
Protein GI107029155 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCG TCGTGACCGG CGCACTCGGC CAGGTCGGCC GCGAACTGGT GTTGCGCGCG 
GGCGAGCAGC CGCTCGTCGG GCTGTCGCGC GCCGCGCTCG ACATCGACGA CGCAGACGCG 
GTGCGCCACG CGCTCGACGA ACAGCGCGCC ACGCTCGTGA TCAATGCCGC CGGATGGACC 
GCCGTCGACC GCGCGGAGGC CGAGCCCGAT GCCGCGTGGC GGGCGAACCG CGACGGCCCC 
GCCGTGCTGG CCGACGCATG CGCCGCGCGC GGCATTCCGT TGCTCCATCT GTCGACCGAC 
TATGTGTTCG ACGGCCGCCT GCCTGGCCCG TACGCGGAAG CCGCCGCCGT CGGGCCGCTC 
GGCGTATACG GCCGCAGCAA GCTCGCGGGC GAGGAAGCGG TGCGCGAGCG GTTGCCCGAC 
CGTCACCTGA TTCTGCGCGT CGCCTGGGTA TTCGGCGCGC ACGGCAGCAA TTTCGTGCGC 
ACCATGCTGC GCCTGGCGCG CGAGCGCGAG GTCGTCGGCG TCGTCGCCGA TCAGTACGGC 
GGCCCGACGC ATGCCGGCGC GATCGCCGAC GCGCTGCTGA CGATCGCGGC GCGCTACCGG 
GCCGGTGAAG CGCTGCGCTG GGGCACCTAT CACCTGTGCG GCACGCCCGT GACCACGTGG 
CACGGCTTCG CCGAAACGAT CTTCACCGAG GCGCGGCGCA CCGGCCTCAT CGACCGCGTG 
CCGCTGGTCC GGCCGATCCG GACCGACGCC TATCCGTTGC CTGCGCCGAG ACCGGCGAAT 
TCCGCGCTCG ACTGCAGCCT CCTGCGAGAA CACTTCGGGG TCGAATCGCC TTCGTGGATC 
GCGGGTCTAA CCGACGTGTT TGCCACCTGG AAGCGAAACC CATGA
 
Protein sequence
MTIVVTGALG QVGRELVLRA GEQPLVGLSR AALDIDDADA VRHALDEQRA TLVINAAGWT 
AVDRAEAEPD AAWRANRDGP AVLADACAAR GIPLLHLSTD YVFDGRLPGP YAEAAAVGPL 
GVYGRSKLAG EEAVRERLPD RHLILRVAWV FGAHGSNFVR TMLRLARERE VVGVVADQYG 
GPTHAGAIAD ALLTIAARYR AGEALRWGTY HLCGTPVTTW HGFAETIFTE ARRTGLIDRV 
PLVRPIRTDA YPLPAPRPAN SALDCSLLRE HFGVESPSWI AGLTDVFATW KRNP