Gene Bcen_6414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6414 
Symbol 
ID4096362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp1039935 
End bp1040654 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content69% 
IMG OID638019702 
ProductABC transporter related 
Protein accessionYP_626249 
Protein GI107029154 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0209306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACG TGCGCGAACT CGTCGCCGGC TACACACCCG AAGTCGACAT CCTGCACGGT 
GTGTCGCTCA CGGTTGGCGC GATCGACATC GTGACGATCC TCGGCCCGAA CGGCTGCGGA
AAATCGACGC TGCTGAAGGC GATCGCGGGC TTCGTGCTGC CGCGCGCCGG CAGCGTGACG
ATCCAGGGCA CGGACGTGGC GCGCGTGCCG GTCCATCGCA AGATCCGCGA GTACGGGATC
GGCTTCGTGC CGCAGACCGA CAACGTGTTC GCGTCGCTGA CCGTGCGGGA GAACCTGATG
CTCGGCGGCC AGTCGATGTC GGCGTTCCCG CGCGAGGCCC GCATCGACGA GCTGTGCGAG
CAGTACCCGG TGCTGCGACG TCGCCACCGG TCGCTGGCTG GCGCGTTGTC TGGCGGCGAG
CGGCAAATCG TGTCGCTCGC CCGCGCGCTG ATGCCGCGGC CCGTGTTGCT GCTGCTCGAC
GAGCCGTCGG CGGGCCTGTC GCCGAAGATG GTCGACGAGG TGTTCGACGC GATCGTCCGG
ATGCGCGACA CCGAGCATAT CGCCGTGCTG ATGGTCGAGC AGAATGCGAT CGAGGCGCTG
CGCATCGCGG ATCGCGGCAT CGTGCTGACG ATGGGGCGCG TCGCGCTCGA AGGCTCCGCT
GCCGAGTTGC TCGACAGCGA CGAGATGCGG CGCCTGTACC TCGGCGGGAG GGCCGCATGA
 
Protein sequence
MIDVRELVAG YTPEVDILHG VSLTVGAIDI VTILGPNGCG KSTLLKAIAG FVLPRAGSVT 
IQGTDVARVP VHRKIREYGI GFVPQTDNVF ASLTVRENLM LGGQSMSAFP REARIDELCE
QYPVLRRRHR SLAGALSGGE RQIVSLARAL MPRPVLLLLD EPSAGLSPKM VDEVFDAIVR
MRDTEHIAVL MVEQNAIEAL RIADRGIVLT MGRVALEGSA AELLDSDEMR RLYLGGRAA