| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6410 |
|---|
| Symbol | |
|---|
| ID | 4096358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 1036246 |
|---|
| End bp | 1037346 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638019698 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_626245 |
|---|
| Protein GI | 107029150 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.217978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAA GTCAGTGGAG TGTCGGTATC TGGATCGCGC TCGGTGCGGT TGCGTCGGGC
GCTGCACAGG CCGACGTGAG CGTGGGCGCG GTGCTGCCGC TGACCGGCGC GAGTGCGTCG
ATCGGCGAAG ACCAGCGCCG CGGCATCGAG CTCGCCGTCG CGCAGATCAA TGCGAAAGGC
GGCGTGCTGG GCCAGAAGCT CGCCGTGCGC ATCGAGGATT CGGGCGGCTC GGCCAATACC
GCGCTCGACG CCGCACGCAA GCTCGCGACC GTCGAGCACG TGCCGGTCGT GCTCGGCGAG
TTCTCGTCGT CGGTGACGAT TCCGGTCGGG CAGTTCCTGG TGCGTCAGGG CGACGTGCAC
ATCAACATCG GCTCGTCGAG TCAGCAAGTG CGCAAGATCG GCGCGGGCTC GTTCAGCGTG
ATCGGGCTGG ACGACCTGTC CGCGCGCTTC GCCGCGCAGG ACGTGTATGC CCGCAAGCTG
CGCCGCATCG CACTGATCGC GCCGAACAAC GGCTATGGCC AGGGCATCGC GGGCGAATTC
AGGAAGCGTT TCGAGGCGCT CGGCGGCACG GTGGTGTCGA CGGTGCTCTA CACGGAAGGG
CAGTCGACCT ATCGCCGCGA GCTGGAGCAG GCGTCGCGCG CGCAGCCCGA CGCGTACGTC
TACAGCGCCT ATGGCCAGGA AGCCGCGACG CTGAACCGCC AGGCGTTCGA GATGCGGCTC
AACCAGCATC CGTGGTACGG CATCTATCTG ACGATGTGCA CGAGCGACAC GCCCGCGCAG
ATCGCGCAAG GCCAGATCGG CCTCGAGGTC GCCGCGCTCG GCGCGGGCGC GAAAGCGTAT
GCGAGCGCCT ATCAGGCCGC GTACAACGAG GCCCCGCGCT CGGCGTTCGG CAGCTATGCG
TACGACGCGA CGCTGTTGTC CGCCGCCGCG ATCGGCCGCG CGCAATCCAT CGAACCGGCG
AAGATTCGCA CGGCGCTCGC GGCATTGGGC AAGTCGTATA CCGGCGTGAC CGGCGCGATC
GCGTTCGATG CCGACGGCCA GCGCGAAGTC CAGCCCTACG AGAAGGTGAT CTACCGCCAA
TCGGTCGTCG CGCAGCAGTG A
|
|---|
| Protein sequence | MKASQWSVGI WIALGAVASG AAQADVSVGA VLPLTGASAS IGEDQRRGIE LAVAQINAKG
GVLGQKLAVR IEDSGGSANT ALDAARKLAT VEHVPVVLGE FSSSVTIPVG QFLVRQGDVH
INIGSSSQQV RKIGAGSFSV IGLDDLSARF AAQDVYARKL RRIALIAPNN GYGQGIAGEF
RKRFEALGGT VVSTVLYTEG QSTYRRELEQ ASRAQPDAYV YSAYGQEAAT LNRQAFEMRL
NQHPWYGIYL TMCTSDTPAQ IAQGQIGLEV AALGAGAKAY ASAYQAAYNE APRSAFGSYA
YDATLLSAAA IGRAQSIEPA KIRTALAALG KSYTGVTGAI AFDADGQREV QPYEKVIYRQ
SVVAQQ
|
|---|
| |