| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6408 |
|---|
| Symbol | |
|---|
| ID | 4096356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 1034315 |
|---|
| End bp | 1035559 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638019696 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_626243 |
|---|
| Protein GI | 107029148 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.874497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA TCGTGCTCGG CGGCGGCATC GTCGGCGTGA CCACTGCATA TTTTCTCGCG
AAGGCCGGCG ACGAGGTGAC GGTGATCGAG CGTCGCGACG GCGTCGCGCT CGAAACCAGC
TTCGCGAATG CGGGGTTGAT CGCGCCTGGC CATTCGTACA CCTGGGCGTC GCCGCGTGCG
CCGAAGATCC TCTTCAAGTC GCTGTTCGCC GATGGCCAGG CGCTGCGGCT CAAATGGACG
CCCGACTGGC GCATGTGGGC CTGGTGCGCG CTGTTCCTGC AGAACTGCAC GGCCGAGCGC
TCGCGCCGCA ACACGTCGAT CAAGGTGCGG CTGTGCCGTT ATGCGCAGCA GCGACTTCAG
CAGGCGACGC GCGACGAACG GCTCGAGTAC GACCGCACGA GCGGCGGGCT GTTGTACCTG
TATCGCGATC CGGCGTCGTT CGAGCGCGGC GTCGCGAACA TGCGGATCCT GACCGACAAC
GGCCTGCCGC TCGATATCCT GGATGCGCGG GCCACCGTCG AACGCGAGCC GGCGCTGCGC
CACGCGGCGG CCGGGATCGC GGGTGCGATC CATTGCCCGA GCGACGAGAG CGGCGACGCG
CATCTGTTCA CGCGCGCGCT CGCCGAGCGC TGCCGTGCGC TCGGCGTCGA ATTTCGCTTC
GGCACGTCGA TCGACGGCGT GCGCGCGAGC GCCGACGCGA TCGACTACGT CGAGACGTCG
CAGGGCCGCG TGAGCGGCGA TCGTTACGTG CTCGCGCTCG GCGCGTATTC GCCGGGCGTC
GCGCGCGCGC TCGGCTACCG GTTGCCGATC TATCCGGTCA AGGGGTACTC GGTCACGCTG
CCGATCGGCG ATACGCACGA GCCGCCGGCG CTCGGCGGCG TCGAGGAGAA CCAGCTCGTC
GCCTGGGCGC GCTTCGGCGA CCGGCTGCGG CTGACCGCGA CCGCCGAGTT CAGCGGCTAC
GACACCACGC ATTCGCCGGG CGATTTCGCG CACATGCTCG CGACCGCGCA GGCACTGTTC
CCGAACGGCG CCGACTACGC GAAGCCGTCG TACTGGGCCG GGCTGCGGCC GATGACGCCG
GAGGGCACGC CGATCATCGG CGCATCCCGG CACCGCAACC TGTTTTTCAA CACCGGCCAC
GGCCATATGG GCTGGACCAT GTCGTGCGGC ACCGCGAAGA TCGTGGCGGA TCTGATTCAC
GGCAAGCGGC CCGACATCGA CATCACCGGG ATGACCCTGC AATGA
|
|---|
| Protein sequence | MKTIVLGGGI VGVTTAYFLA KAGDEVTVIE RRDGVALETS FANAGLIAPG HSYTWASPRA
PKILFKSLFA DGQALRLKWT PDWRMWAWCA LFLQNCTAER SRRNTSIKVR LCRYAQQRLQ
QATRDERLEY DRTSGGLLYL YRDPASFERG VANMRILTDN GLPLDILDAR ATVEREPALR
HAAAGIAGAI HCPSDESGDA HLFTRALAER CRALGVEFRF GTSIDGVRAS ADAIDYVETS
QGRVSGDRYV LALGAYSPGV ARALGYRLPI YPVKGYSVTL PIGDTHEPPA LGGVEENQLV
AWARFGDRLR LTATAEFSGY DTTHSPGDFA HMLATAQALF PNGADYAKPS YWAGLRPMTP
EGTPIIGASR HRNLFFNTGH GHMGWTMSCG TAKIVADLIH GKRPDIDITG MTLQ
|
|---|
| |