Gene Bcen_6407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6407 
Symbol 
ID4096355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp1033502 
End bp1034185 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content70% 
IMG OID638019695 
ProductAsp/Glu racemase 
Protein accessionYP_626242 
Protein GI107029147 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.92943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGCGA CCGATCATAC GATCGAATAC GAGTGGCGAC GTCTGCTCGC CATCGATGGC 
GTCGCGTTCT ACGAAAGCCG GATCGCGAAT TCGGCCGAGA TCACGGCCGA AACGCTCGCG 
CGGATGGACG GCGGCATCTG CGCGGCGGTC GAGTTGATCC GGCCGGGCGA GCGCCTCGAC 
GTCGTGGCGT TCGGCTGCAC GTCGGCGTCG ATGGTGCTCG GCGAGGAACG CGTCTTCGAG 
CGCATTCGCG AGGCGCGGCC CGGCGTCGCG TGCACCACGC CGATTACCGC GGCACGCGTC 
GCGCTGACGG CGCTCGGCGC GCGCGGCGTC GCACTGCTGA CGCCATACGA GCGCGCGATC 
AACGATGCGA TGGCCGCGTA CCTGCGTGCA CGCGGCGTCG ATATCGTGCG GGTGGGCTCG 
TTCGAGCACC GCGACGACAA CGAGGTCGCC CGGATCGAGC GCTCGTCGAT CGAGCACGCG 
GTGCTGACGC TCGCCGCCGA TCCGGCCGTC GATGCGGTAT TCGTGTCGTG CACGAGCCTG 
CGCATCGTCG ATGCGCTGGC CGACATCGAG GCGCGGGCGG GCAAACCCGT GCTGTCGAGC 
AATCACGCGC TCGCATGGCA CGCGCTGCGG CTCGCGGGCA TCGACGATCC CGTGCCGGGC 
TTCGGCAGCC TGCTGATGCG CTGA
 
Protein sequence
MLATDHTIEY EWRRLLAIDG VAFYESRIAN SAEITAETLA RMDGGICAAV ELIRPGERLD 
VVAFGCTSAS MVLGEERVFE RIREARPGVA CTTPITAARV ALTALGARGV ALLTPYERAI 
NDAMAAYLRA RGVDIVRVGS FEHRDDNEVA RIERSSIEHA VLTLAADPAV DAVFVSCTSL 
RIVDALADIE ARAGKPVLSS NHALAWHALR LAGIDDPVPG FGSLLMR