Gene Bcen_6403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6403 
Symbol 
ID4096351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp1029374 
End bp1030552 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content67% 
IMG OID638019691 
Productmandelate racemase/muconate lactonizing-like protein 
Protein accessionYP_626238 
Protein GI107029143 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGC CGACGATACG CGCGGTCCGC GCGCTGACGG TGCGTGGTGG CGGTGCCGAC 
TACCACGATC AGGATGCCGG TCACTGGATC GACGACCACA TCGCGACGCC GATGTCGCGC
TACCCCGAAT ACCGGCAAAG CCGCCAGTCG TTCGGCATCA ACGTGCTCGG CACGCTCGTG
ATCGAGGTCG AGGCCAGTGA CGGCACGGTC GGTTTCGCCG TGACGACCGG CGGCGAGATC
GGCGCGTTCA TCGTCGAGCG GCATCTTGCG CGCTTCATCG AAGGGCAGCG CGTGACCGAC
ATCGAGAAGA TGTGGGATCA GATGTTCCAC GCGACGCTGT ACTACGGGCG CAAGGGTGTC
GTGCTCAATG CGATCTCCGG CGTCGATCTC GCGCTGTGGG ATCTGCTTGC CAAGGTTCGG
CGGGAGCCCG TGCACCAGTT GCTCGGCGGC AAGGTGCGCG ACGAGCTCGA GTTCTACGCG
ACCGGCGCCC GGCCCGATCT CGCGAAGGAG ATGGGCTTCA TCGGCGGCAA GCTGCCGTTG
CATCACGGCC CGGCCGAGGG AGAGGCCGGC CTGCGCCGCA ATCTCGACGC GCTTGCCGAC
ATGCGTTCGC GTGTCGGCGC CGATTTCTGG CTGATGCTCG ACTGCTGGAT GAGCCTCGAC
GTGCCGTATG CGACGCGGCT CGCGCACGAA GCGCACGCGC TCGGCCTGAA ATGGATCGAG
GAATGCCTGC CGCCCGACGA CTATTGGGGC TATGCGAAGC TGCGCCGCGA CGTGCCGCGC
GGCATGCTCG TCACGACCGG CGAGCACGAG GCGACCCGCT GGGGCTTCCG CATGCTGCTG
GAGATGGAGT GCTGCGACAT CATTCAGCCG GACGTGGGCT GGTGCGGCGG GCTCACCGAG
CTGATGCGGA TCTCGGCGCT CGCCGATGCG CGCGGCGTGC TGGTGATTCC GCACGGCTCG
TCGGTTTACA GCTATCACTT CGTCACGACG CGCCACAACA GCCCGTTCGC CGAATTCCTG
ATGATGGCGC CGCAGGCGGA TCGTGTCGTA CCGATGTTCG ATCCGCTGCT GCTCGACGAA
CCGGTGCCGG TCGGCGGGCG GATGAAGGTG CCCGACACCC CCGGGTTCGG CGTGCGTCTG
AATCCGGACG TGCGCATGCA GCGCCCGTAC GAACACTGA
 
Protein sequence
MSMPTIRAVR ALTVRGGGAD YHDQDAGHWI DDHIATPMSR YPEYRQSRQS FGINVLGTLV 
IEVEASDGTV GFAVTTGGEI GAFIVERHLA RFIEGQRVTD IEKMWDQMFH ATLYYGRKGV
VLNAISGVDL ALWDLLAKVR REPVHQLLGG KVRDELEFYA TGARPDLAKE MGFIGGKLPL
HHGPAEGEAG LRRNLDALAD MRSRVGADFW LMLDCWMSLD VPYATRLAHE AHALGLKWIE
ECLPPDDYWG YAKLRRDVPR GMLVTTGEHE ATRWGFRMLL EMECCDIIQP DVGWCGGLTE
LMRISALADA RGVLVIPHGS SVYSYHFVTT RHNSPFAEFL MMAPQADRVV PMFDPLLLDE
PVPVGGRMKV PDTPGFGVRL NPDVRMQRPY EH