Gene Bcen_6395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6395 
Symbol 
ID4096480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp1021482 
End bp1022864 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID638019683 
Productmajor facilitator transporter 
Protein accessionYP_626230 
Protein GI107029135 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG AAACCGTAAT CGACATCGGC ACGGTGATCG AGCGGCAGCA GACCACCCGC 
TTCGGTATCC TGCTGATCGT CGCGATGGGC GTGATGATGA TGACCGAGGG CTACGACCTC
GCCGCGATGG CGTTCGCGGC CCCGGCGCTG AGCCGCGCGT GGCACCTCAA GCATGGCGTG
CTCGGCCCGG TGTTCGGCGC ATTCGTATTC GGCACGATGA TCGGCGCGTT CGTGCTCGGC
TATCTCGGCG ACGTGATTGG CCGCAAACGC ATGATCGTGA TCGGCAGCGT CGTGCTCGCG
GGCTTCACGC TCGCCGCGTC GCGTGCCACC GGCCTCGAAC AGCTGCTGGT GCTGCGCTTT
CTGGCGGGCA TCGGCATCGG CGGCGTGGTG CCGAACGCGA TCGCGTATAC GACGGAGTTC
GCGCCGAAGC GCTGGCGCGC GACGTGGGTC ACGCTGATGT ACAGCGGCTA TACGATCGGC
AGCAGCGTGG GCGGTCTCGT GTCGGCGTGG CTCGTGCCGA AGTTCGGCTG GCAGGTGGTG
TTCGTGATCG GCGGCCTCGC GCCGCTCGTG TCGAGCGCGA TGTTGTGGTT CGCGGTGCCG
GAGTCGATCC GCTTCCTGAC GCTCAAGGGC CGTCACGCCG AAGTCGCGCG AATCGTCGCG
CGGATCGCAC CGGGCTTCGC CGTCGCGCCG CAGGCCCGCT TCGTGATCGG CGGCGCTTCG
CCGGGTCACG CGCACGAGCA CCGCCGCGAC GGCTCGCTGC GGTTGCTGTT CGCGGGTCGG
CTGCGCGCGC TGACGCCGGT GCTGTGGGCA GTCTACATCG CGAACTCGAT GGCGCTGTTT
TTTCTCAGCA GCTGGCTGCC GGTGCTGATC GAAAGCGTGG GCCTCGCACC GCGCGACGCG
GCGCTCGTCT CGACGATGTT CCAGGTCGGC GGCACGCTGG GCGGGCTCGC GCTGATGCGC
TTCGTCGACA CGCGCGGCGC CATCATCATC ACCGTGCTGC CGCTCGTCGG CACGCCCCTC
GTCGCGCTGC TCGGCACCGG ACTGCCCGCC CCGATGCTGG TCGCGGCGGT GTTCCTGACC
GGCTTCACGG TGGTCGGCAC GCAGTTTGGC CTGAACGCGG TCGCGGCACT CGTCTATCCG
ACCGCGCTGC GCGCGAAAGG CACGGGCGCG GCGGTCGGTA TCCAGAAGAT CGGCGCGATC
GCCGGGCCGG TGATCGGCGG GATGCTGATG TCCGCGCATC TGCCGGTCGA ACGGATGTTC
TTACTCGGCG CGGTGCCGGT CGCCTTCGTC GCGCTCCTCG CGTTCGCGCT CGGCCGCCTG
CATCGCCGCG GCGACGATAC CGCGCCGGAC AACGCTCAAA CAGGAGCCGC CCATGTCGCT
TGA
 
Protein sequence
MSGETVIDIG TVIERQQTTR FGILLIVAMG VMMMTEGYDL AAMAFAAPAL SRAWHLKHGV 
LGPVFGAFVF GTMIGAFVLG YLGDVIGRKR MIVIGSVVLA GFTLAASRAT GLEQLLVLRF
LAGIGIGGVV PNAIAYTTEF APKRWRATWV TLMYSGYTIG SSVGGLVSAW LVPKFGWQVV
FVIGGLAPLV SSAMLWFAVP ESIRFLTLKG RHAEVARIVA RIAPGFAVAP QARFVIGGAS
PGHAHEHRRD GSLRLLFAGR LRALTPVLWA VYIANSMALF FLSSWLPVLI ESVGLAPRDA
ALVSTMFQVG GTLGGLALMR FVDTRGAIII TVLPLVGTPL VALLGTGLPA PMLVAAVFLT
GFTVVGTQFG LNAVAALVYP TALRAKGTGA AVGIQKIGAI AGPVIGGMLM SAHLPVERMF
LLGAVPVAFV ALLAFALGRL HRRGDDTAPD NAQTGAAHVA