Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6390 |
Symbol | |
ID | 4096475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 1015898 |
End bp | 1017301 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638019678 |
Product | major facilitator transporter |
Protein accession | YP_626225 |
Protein GI | 107029130 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.536228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAAC CCTTGCCGGA TGCGCGCACG GTGGACGTGT CGCGCCTGAT CGACGAACAG AGAATCGGCC GCTTCGCGAT CCTGCTGATC GCGTCGACCT GGCTCGTGAT GCTGACCGAC GGCTACGAGC TCAGTGCGCT GGCGTTCGCC GCGCCTTCGC TGATTCGCGC CTGGCACATC GAGCGCAGCG TGCTCGGGCC GGTGTTCGGC GCCAACGTCT TCGGCATCAT GATCGGCTCG ATCCTGTTCG GCTATATCGG CGACCGGATC GGGCGCAAGC GCGCGATCCT GTTCGGTGCA TGCTGGTACG GGCTCGTCAC GCTCGCGACC GCATGGGCGT CGAGTGTCGA CCACCTGCTG TGGCTGCGCT TCGCCGCGGG CATCGGCATC GGCGGCGCGG TGCCGAACGC GTTCGTGCTC GTGTCGGAAT TCGCGCCGAA GCGGCTGCGG GCGACCTGGG TCACGCTGAT GTTCACCGGC TATACGCTCG GGGCGGGCTT TGGCGGCGGC GTCGCCGTGT GGCTCGTGCC GCACTTCGGC TGGCCGGCGG TATTCGTGGT CGGCGGGCTC GCGCCGCTCG TGGTGGCCGC CGCGCTGTCG TTCGTGATGC CGGAGTCGCT GCGCTATCAG GTACTGAAGG GCTGGCCCCG CGACGGCATT GCCGCGACTG CCGCGCGCGT GCGGCCCGAA CTCGCGTTGC CGCCGGAGGC GCGCTTCGTC GTGACCGACG AGCGCCGCGT CGCGAAGTTC TCGCCGCGCA TGCTGTTCGC CGGCCGGTTG CGCTACGTGA CGACCGCGCT GTGGCTCGCG TACATCGCGA ATTCGATGGC GCTGTTCTTC CTGCAAAACT GGCTGCCGGT GCTGATCGAG GCGACCGGCG TCGCCGCGCA TCGCGCCGCG CTGATGACGA CGCTGTTCTC CGTCGGCGGC ACGCTCGGCG GCCTCGTGCT GATGCGCTTC ATCGACCGCC ATGGCGTGCG GCTCGTCACG TGTCTGCCGC TCGTCGGCTT TCCGCTCGTC GCGGCGCTCG GCATGAACCT CGAGACCGCC TGGCTGACGG CCGCCGTGTT CGGCGTCGGC TTCTGCGTCG CCGGCACCCA GGCAGGGCTC AATGCCGTCG CGTCGATCGT CTATCCGACC AGCTTCCGCT CGAAAGGCAC CGGCACCGCG ATCGGCGTGG CGAAGATCGG CTCGATCTCC GGCCCGATGA TCGGCGGGAT GCTGCTCGCC GCGCATGTGC CGGTGCGCGA GCTGTTCCAG GTCGCGGCGC TGCCGGTCGT CGCCGTCGCG GCGCTGATGT TCGTGCTCGG TCGCATGTAC CGGCCCGGCG ACACGCACGA CGACGGGCTC GCGGCGTGTG ATCCCGCGGG CGCCGAACCG CCGCTACCCG CAGCGGAGCG CTAG
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Protein sequence | MIQPLPDART VDVSRLIDEQ RIGRFAILLI ASTWLVMLTD GYELSALAFA APSLIRAWHI ERSVLGPVFG ANVFGIMIGS ILFGYIGDRI GRKRAILFGA CWYGLVTLAT AWASSVDHLL WLRFAAGIGI GGAVPNAFVL VSEFAPKRLR ATWVTLMFTG YTLGAGFGGG VAVWLVPHFG WPAVFVVGGL APLVVAAALS FVMPESLRYQ VLKGWPRDGI AATAARVRPE LALPPEARFV VTDERRVAKF SPRMLFAGRL RYVTTALWLA YIANSMALFF LQNWLPVLIE ATGVAAHRAA LMTTLFSVGG TLGGLVLMRF IDRHGVRLVT CLPLVGFPLV AALGMNLETA WLTAAVFGVG FCVAGTQAGL NAVASIVYPT SFRSKGTGTA IGVAKIGSIS GPMIGGMLLA AHVPVRELFQ VAALPVVAVA ALMFVLGRMY RPGDTHDDGL AACDPAGAEP PLPAAER
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