Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6379 |
Symbol | |
ID | 4096925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 1004511 |
End bp | 1005179 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638019667 |
Product | amino acid ABC transporter permease |
Protein accession | YP_626214 |
Protein GI | 107029119 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTTC AGTTCGCCCC GATCCTCGAA CAGTGGCCGT ATCTGCTTGC AGGTGCATGG CTGAGCCTGC AGATCGCCAT GCTCGCGTTC GTGTTCGGCA TGCTGATCGG CGTCGTATGC GCGTCCATTT TGCATTACGG GCCGGCATCG CTAAGGCGAG TCGTCGCCGC CTACGTCATG TTCGCGACCA ACACGCCGCA GCTCGTCCAG ATCTTCTTCC TGTTCTTCGC GCTGCCGGAA GTCGGCGTGA CGCTGAGCCC GTTTTCGGCG GTGCTGATCG GCGCGACCTT CAATGCAGGC GCCTACCTGT GCGAAATCCA GCGTGCCGGT TTTGCGTCGG TGCGTCGAGC GGAGATCGAG GCGGCAGAGG TACTCGGGTT TTCGACCGCG CAGATAGTGC GTTACGTCAT CTTTCCACAT GTGTTGAAAG TCATGTTTCC GCCGTTGTCG AACCAGTTCA TCATGATGAC GCTCGGGACT TCGATGGCAT CGGTGTTCGG TGTCGAGGAA TTGACCGGGC GAACGTTCAA TCTCAGTTCG CAGACGTATC TGTCCATCGA GGCGTTTAGC GTGGCGGCGG TGATGTACAT CGCGATCACG TTGATTGCGA CGTTCGCGCT CGCGGCATTT GGGCGGTATG CCTGCCGAGC GAAGATAAAG GTGTTTTGA
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Protein sequence | MALQFAPILE QWPYLLAGAW LSLQIAMLAF VFGMLIGVVC ASILHYGPAS LRRVVAAYVM FATNTPQLVQ IFFLFFALPE VGVTLSPFSA VLIGATFNAG AYLCEIQRAG FASVRRAEIE AAEVLGFSTA QIVRYVIFPH VLKVMFPPLS NQFIMMTLGT SMASVFGVEE LTGRTFNLSS QTYLSIEAFS VAAVMYIAIT LIATFALAAF GRYACRAKIK VF
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