| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6376 |
|---|
| Symbol | |
|---|
| ID | 4096922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 1001762 |
|---|
| End bp | 1003021 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638019664 |
|---|
| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
|---|
| Protein accession | YP_626211 |
|---|
| Protein GI | 107029116 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCAA AGTTGCTTTC AGCAGCGCTG CTCGACACGA TCGATCGAAA TTTTGCCACG
CAGGTCAATT TTCTTGCCGC ACTTGTGCGT AAGCCGTCGG ACAACCCACC CGGCGACTGC
GCCGCACATG CGGACATGGC AGCCGACTGG CTGGAGACAC TGGACTTCAC CGTGGAGCGG
CATTCGGTGC CCGCGCCTGA GGTCATGGCG GCCGGTATGG TCAGCGCGAC CAATCTCGTC
ATTCGCCATC GTTTCGGCGA CGGCCCGGTC GTGGCGCTGA ACGCGCATGG CGATGTCGTT
CCCCCGGGCG ACGGCTGGAG TGCGGATCCG TACGGTGCCG AAATCCGGGA CGGCTGGATG
ATCGGCCGCG GCGCCGCCGT ATCGAAATCC GATTTCGCGA CGTATGCGTT CGCGCTCAAG
GCGCTGATCG ATAGCGGTGC GCAGCTGGCC GGTACGATCG AACTTCATTT GACATACGAC
GAGGAGACCG GCGGCCTGGT CGGTCCCGCC TGGCTCTTGA AGCAGGGCAT CGTGGAGCCC
GACTATGCGA TCTGTGCGGG CTTCTCGTAT TCGATCACGA CCGCACATAA CGGTGCGGTG
CATCTGGAGG TGACGGTGCG CGGCAAGTCG GCGCACGCTG CACGGCCCGA TACGGGCCAT
GATGCGCTGG AAGCGGCTAC TGCGGTACTC GGTGCGCTTT ATGCCCATCG GAACGCACTG
CGCGAGATCC GCTCGACGAC GCCCGGCATT TCGCATCCGA CGCTCGTGGT TGGCCTGATC
GAAGGGGGGA TCAATACGAA CGTCGTGCCG GACAAGGTGA CGTTCCGGCT CGACCGGCGC
GTCATTCCGG AGGAATCGCC TCACGACGTG GTGAGCGAGC TGAAGACGCT GATCGGCATG
GCAGTCACCG GTTGGCCCGG CATCGACGTG GAGATTCGCG AAGTTCTCGT GACGTCGCCG
CTGCGCGCCA TCGATGGCGC AGAGCGCTTG TCCGCTGCAC TCCAGCGGGC GGCCAAGGAG
GTGTTCGGTC ACGATATCCC GACGGAAGGC GTGCCGCTCT ATACGGATGC ACGCCTGTAT
TGCGAAGCAG GTGTTCCGAC GGTCATTTAC GGGGCGGGCC CGCGCACGCT GCTCGAAGCG
AACGGCCACC GTGCCGACGA GCGCGTGGCA ATCGAGGACC TGCGCATCGC GACGAAAACG
GTCGCGTTGG CGCTGCAGGA CCTGCTCGCG AGTCCGACGC ACGAGTCGAA TCAACCATAG
|
|---|
| Protein sequence | MDAKLLSAAL LDTIDRNFAT QVNFLAALVR KPSDNPPGDC AAHADMAADW LETLDFTVER
HSVPAPEVMA AGMVSATNLV IRHRFGDGPV VALNAHGDVV PPGDGWSADP YGAEIRDGWM
IGRGAAVSKS DFATYAFALK ALIDSGAQLA GTIELHLTYD EETGGLVGPA WLLKQGIVEP
DYAICAGFSY SITTAHNGAV HLEVTVRGKS AHAARPDTGH DALEAATAVL GALYAHRNAL
REIRSTTPGI SHPTLVVGLI EGGINTNVVP DKVTFRLDRR VIPEESPHDV VSELKTLIGM
AVTGWPGIDV EIREVLVTSP LRAIDGAERL SAALQRAAKE VFGHDIPTEG VPLYTDARLY
CEAGVPTVIY GAGPRTLLEA NGHRADERVA IEDLRIATKT VALALQDLLA SPTHESNQP
|
|---|
| |