Gene Bcen_6343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6343 
Symbol 
ID4097001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp962944 
End bp964029 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content70% 
IMG OID638019632 
Producthypothetical protein 
Protein accessionYP_626179 
Protein GI107029084 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACTG CTCCGACTCC CCCTCTCAGC CACGCCGCGC CGTCGATGCG CGGCCAGTTG 
AACGGCGTGC TGTTCGTCGC GCTGTTCGCC GCTGCCGTCA CGAGCCTGTC CGAGCTTCCC
GCGATCGCGG GGCTCGGCCT GTCGCCGCTG ATCGTCGGCA TCGTCGCCGG CGCGCTGTAC
GGCAACGCAC TGCGCGACGG CATGCCGGCC AGCTGGGCGG CCGGCGTCAA TTTCTCCGCC
CGCAAGCTGC TGCGCATCGC GGTCGCGTTC TTCGGCTTGC GCGTGAGCCT GCAGGAGATC
GCGCAGGTCG GGCTGCCGGG CCTCGCGGTG TCGGTACTGA TCGTCGTCAG CACGCTCGCG
ATCGGCACCT GGGTCGGCAT GAAGCTGATG AAGCTCGACC GCGACGCCGC GCTGCTGACC
GCCGCCGGCA GCGCGATCTG CGGCGCGGCC GCGGTGCTCG CGTTCGAGTC GACGCTGCAG
TCGAAGCCGC ACCAGAGCGC GATGGCGGTG GGCAGCGTCG TGCTGTTCGG CACGCTGTCG
ATGTTCCTGT ATCCGCTCGC CTACCACGCC GGGCTGCTGA ACCTCGATCC GGCCGGCCTC
GGCCTGTTCT TCGGCGGCAC GATCCACGAA GTCGCGCAGG TGGTCGGCGC GGCGAGCGAC
ATCAGCCCGG AGGTCGTGCA CGTCGCGACG ATCGTGAAGA TGACGCGCGT GATGCTGCTG
GTGCCCGTGC TGCTCGCGCT CGGCTGGTGG CTCGCCCGTT CGTCCCGTTC CGCGCGCGCG
GCTCACGACA CGGCCGGCGG CACGCACCGC CAGCGCAAGG TGGCGGTGCC CTGGTTCGCG
CTCGGCTTCC TCGGCTTCGT GATCGTCAAT TCGCTGAACG TATTGCCCGC GGACGTCACG
CATACGCTGA ACGTGCTCGA CACCTTCGCG CTGACGATGG CCATGACCGC ACTCGGCATC
GAGACGCGCG TCGCGCAGAT CCGCGCGGCC GGCCCGCGTG CGCTGATGAC CGGCCTGATC
CTGAACGTGT GGCTGATCGC CGGCGGCTAC GGGATCACCT GGGCCGTGCA GCACTGGCTT
GGCTGA
 
Protein sequence
MSTAPTPPLS HAAPSMRGQL NGVLFVALFA AAVTSLSELP AIAGLGLSPL IVGIVAGALY 
GNALRDGMPA SWAAGVNFSA RKLLRIAVAF FGLRVSLQEI AQVGLPGLAV SVLIVVSTLA
IGTWVGMKLM KLDRDAALLT AAGSAICGAA AVLAFESTLQ SKPHQSAMAV GSVVLFGTLS
MFLYPLAYHA GLLNLDPAGL GLFFGGTIHE VAQVVGAASD ISPEVVHVAT IVKMTRVMLL
VPVLLALGWW LARSSRSARA AHDTAGGTHR QRKVAVPWFA LGFLGFVIVN SLNVLPADVT
HTLNVLDTFA LTMAMTALGI ETRVAQIRAA GPRALMTGLI LNVWLIAGGY GITWAVQHWL
G