Gene Bcen_6341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6341 
Symbol 
ID4097366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp960438 
End bp961058 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID638019630 
ProductTetR family transcriptional regulator 
Protein accessionYP_626177 
Protein GI107029082 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0497044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAC AGCGCTTAAC TCGCGAGCAG AGCAGGGACC AGACGCGCGA ACGTCTGCTG 
AAAGCCGCGC ATCGCATTTT TCTGAAGAAA GGGTATGTGG CCGCGAGCGT CGAGGACATC 
GCGGCGGCCG CCGGCTACAC GCGCGGCGCG TTCTACTCGA ATTTCCGCAG CAAGTCCGAC 
CTGTTGCTGG AATTGCTGGA GCGCAACCAC GAGGAGGTGC AGGCCGACTT CGTCGCGATT 
TTCGAAGGGG GCGGCACGCG CGAGCAGATG GAATCGATGT CGCTCGCGTA CTACCGGACG 
CTGTTTCGCG ACGACGAGTA CTCGCTGCTG TGGGGCGAGG CGAAGCTGCA GGCGGCGCGC 
GACGCGAAGT TCCGCGTGCG CTTCAACCAG TTCCTGCACG GCAAGCGCGT GCAGATGGCC 
GAATTCATCC AGCGCTTCGC CGAGCGCTCG GGCACGCCGC TGCTGCTGCC GGCCGATACG 
CTCGCGTTCG GGCTGATGTG CCTGTGCGAC GGCGTGCAGT CGTACTACAC GGCCGATCCG 
CAGCACGTGT CGGCCGACGT GGCCGAGTCG GTGCTTGGCG GGTTCTTCGC GCGGGTCGTG 
CTGGGGCGTG CGCCGGACTG A
 
Protein sequence
MKPQRLTREQ SRDQTRERLL KAAHRIFLKK GYVAASVEDI AAAAGYTRGA FYSNFRSKSD 
LLLELLERNH EEVQADFVAI FEGGGTREQM ESMSLAYYRT LFRDDEYSLL WGEAKLQAAR 
DAKFRVRFNQ FLHGKRVQMA EFIQRFAERS GTPLLLPADT LAFGLMCLCD GVQSYYTADP 
QHVSADVAES VLGGFFARVV LGRAPD