| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6340 |
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| Symbol | |
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| ID | 4097365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | - |
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| Start bp | 959140 |
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| End bp | 960249 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638019629 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_626176 |
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| Protein GI | 107029081 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.900675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCGCT CCGGTTCCCG CGCCGCGCTG CTGATCGGCG CCGCGCTCGT CCTTGCCGCC
TGTCATCCGA AAGAATCCGC ACCACCCGCC CCGCGCCCCG TCGTCGCGCT GCCCGCGCGG
GCCGACACCG CCGCGGTCGC GCGCACGCTG CCCGGCGACA TCCAGCCGCG CTATGCAACG
CCGCTGTCGT TCCGCATCGC CGGCAAGATC ATCGAGCGCA AGGTTCGGCT CGGCGACACG
GTGAAAGTCG GCCAGGTCGT CGCGCTCCTC GATCCGTCCG ACGTCGAGAA GAACGCCGCG
AGTGCGCAGG CGCAATTCGA TGCCGCGTCG CACAGCCTCG CGTTCGCGAA GCAACAGCTC
GATCGCGATC GTGCGCAGGC CCGCGAAAAC CTGATCGCGA CCGCGCAGCT CGAACAGACC
CAGAACAGCT ACACGTCGGC GCTCGCGCAG CGCGACCAGG CGCAGCAGCA GCTCGCGCTC
GCGAAGAACC AGCTGCGCTA CGCGACGCTC GTCGCCGATC ATGCGGGCAC CATCACCGCC
GAACAGGCCG ATACCGGCCA GAACGTGTCG GCCGGCCAGC CGGTCTACCA GCTCGCGTGG
TCGGGCGACG TCGACGTGGT CAGCGACGTG CCCGAGGCCG CGCTCGCGTC GCTCGCGCCC
GGTCATGCGG CCACCGTCAC GCTGCCGTCG CTGCCGGGCC GACAATTCGC CGCGAAGGTG
CGCGAAATCG CGCCGGCCGC CGATCCGCAA AGCCGCACCT ACCGCGTGAA GCTCACGCTC
GGCACGCCCG ATCCGGCGAT CCGGCTCGGC ATGACCGCGG ACGTCGCGTT CGACGGCGCG
CCGGCCGCCG GCGACGCGCA GCCGATCACG CTGCCCGCGA CCGCGCTGTT CCACGACGGC
CCGCATCCGG CCGTGTGGAT CGTGCGCACC AGGGACGACA CGCTCGAGTT GCGCCGCGTC
GACGTCGCGC GCTTCAACGA GCGCACCGTC ACCGTCTCGC ACGGGCTGCA GCCGGGCGAG
CGCGTCGTGC TGCAGGGCGT GCATACGGTC AGCGCGGGCG AGAAGGTGCG CGCGATCGCG
CCGCTGCATC CGGAGGACTT CGCATCGTGA
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| Protein sequence | MNRSGSRAAL LIGAALVLAA CHPKESAPPA PRPVVALPAR ADTAAVARTL PGDIQPRYAT
PLSFRIAGKI IERKVRLGDT VKVGQVVALL DPSDVEKNAA SAQAQFDAAS HSLAFAKQQL
DRDRAQAREN LIATAQLEQT QNSYTSALAQ RDQAQQQLAL AKNQLRYATL VADHAGTITA
EQADTGQNVS AGQPVYQLAW SGDVDVVSDV PEAALASLAP GHAATVTLPS LPGRQFAAKV
REIAPAADPQ SRTYRVKLTL GTPDPAIRLG MTADVAFDGA PAAGDAQPIT LPATALFHDG
PHPAVWIVRT RDDTLELRRV DVARFNERTV TVSHGLQPGE RVVLQGVHTV SAGEKVRAIA
PLHPEDFAS
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