Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6338 |
Symbol | |
ID | 4097363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 954423 |
End bp | 955991 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638019627 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_626174 |
Protein GI | 107029079 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGAT CGATGACCCT GAAAACGAAA GCCGTGCGCG CGCTCACGGT GGCGAGCCTG GCCGGCCCGC TCGCGGGCTG CGCGTGGTTC GCGCCGAGCG GCGAGCCGCC CGCGATGCCG TCGCCCGCGC ACTACGGCGC CGCGCCGCAA GTCGAGCAGA CCGTGTCCGC GCACGGCGTC GCGCAGCAGT TCGAGGTCGG CGCGCAGCCG GTGCCGGACT GGTGGAAACA GTACCGTTCC GACGCGCTGA ACGCGCTCGT CGACGAAGGG CTGCGCAACA GCCCGACATT GAGTGCGGCG TCGCATTCGC TGGATGCCGC GCGCGAACAG TTACGCGGTC AGATCGGCAG CTCGATGCTG CCGTCGATCG ACGCGGGCGG CCAGGCCACG CGCCAGCGCG CGCTCGGCGT GCCGATTCCC GCGCTCGGCG CGCCGACGCT GCTGTACGAC ACGTTCGTCG GGCAACTGCA GGCGAGCTAC ACGGTCGACC TGTTCGGCGT GTCGCGCTTC GCGAACCGCG CGCTCGCGAA ACGCGTCGAC GTCAGCGCGT TCCAGCTCGA ATCCGCGCGG CGCGCGCTGG CCGCGAACAT CGTCACCGCA TCGATCACCG TGTCGGTGCT CAATGCGCAG ATCGACACGA CCGAGCGGCT CGTCGCGCTC GCGAACGACC AGGCGCACGA CGCGGAGCGC CGCCATGCGC TCGGTTCGGC CTCGCGCAGC GACGCGTTGA ACGCCCGGCA AAGCGCCGAC ACGTTCGCCG CGAGCCTGCC CGCACTGCGC CAGCAGCGCG ACTCGGCGCG TCACGCGCTG GCGGTGCTGG TCGGCCGCAC GCCCGACCGG CCGCCGGCCG ATCTCGCGCT CACCGATCTG CACCTGCCCG AGCAGGTGCC CGTCGTCGTG CCGTCGGACC TGCTGCAAAG CCGCCCCGAC ATCCAGGCCG CCGACGCGGG GCTGAAGGCC GCCGCCGCCG AAGTCGGCCT CGCGACCGCG CAGATGTTTC CGCAACTGTC GCTGTCGGCG GCGATGGGCA AAGGCGGCTT CAGCTGGCCG GCGATGCTGT CGGGCGCCGG CGCGATCTGG AACGTCGGCG CGTCGCTGAG CCAGCCGATC TTCCATGGCG GCGCGCTGCT CGCCCAGCGC CGCGCGGCGA AAGCGACCTA CGAGGCCGCG GTCGACCAGT ACAAGCAGGC GGTGCTCGGC GCGTTCCAGA ACGTCGCCGA TTCGCTTGCG GCGCTCGAGC ACGACGCGGA GGCGCTCGAT GCGTCGTCGC GCGCCGCGCT GTCCGCACGG GGCGCGTACG ACGACGCGGC CGCTCGCGTG CGGCTCGGTG CGTTGCCGCC GTCGGCGGCG CGCGCGAGCG AGCTGCAGTA CCGCAATGCG CGGCTCGACG AGATTCGCGC GACCGGCGCA CGGTTCGCGG ATACCGCGCG GCTTTACCAG GCGATGGGCA CACCGCCGGC CGACACCGGC GACAAGTCCG GTAAAACCGG CCACGCGGCC GGCGACGGCA CAGCCGGCAC GCAAGCACGC GCCGCCACGC CCGACGCCGC CGTCCCTTCG GCGCAATAA
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Protein sequence | MDRSMTLKTK AVRALTVASL AGPLAGCAWF APSGEPPAMP SPAHYGAAPQ VEQTVSAHGV AQQFEVGAQP VPDWWKQYRS DALNALVDEG LRNSPTLSAA SHSLDAAREQ LRGQIGSSML PSIDAGGQAT RQRALGVPIP ALGAPTLLYD TFVGQLQASY TVDLFGVSRF ANRALAKRVD VSAFQLESAR RALAANIVTA SITVSVLNAQ IDTTERLVAL ANDQAHDAER RHALGSASRS DALNARQSAD TFAASLPALR QQRDSARHAL AVLVGRTPDR PPADLALTDL HLPEQVPVVV PSDLLQSRPD IQAADAGLKA AAAEVGLATA QMFPQLSLSA AMGKGGFSWP AMLSGAGAIW NVGASLSQPI FHGGALLAQR RAAKATYEAA VDQYKQAVLG AFQNVADSLA ALEHDAEALD ASSRAALSAR GAYDDAAARV RLGALPPSAA RASELQYRNA RLDEIRATGA RFADTARLYQ AMGTPPADTG DKSGKTGHAA GDGTAGTQAR AATPDAAVPS AQ
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