| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6335 |
|---|
| Symbol | |
|---|
| ID | 4097360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 951185 |
|---|
| End bp | 952567 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638019624 |
|---|
| Product | sigma-54 dependent trancsriptional regulator |
|---|
| Protein accession | YP_626171 |
|---|
| Protein GI | 107029076 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGC ACGACACCAT TCCGATCGTC CCTGTTCCGC GCCGCGACGC GATGCCCGAC
GTGCGCGCGC TCGTCGCGTA TCTCGAGCAG GACCCGCAGC CGATGATCGT GGTCGACCCC
GACTACCGCA TCCTCGCGGC GAACGATGCG TACCGGCGTC AGTTCGGCGT GGCCGGCGTC
GAGCACGTGG GCCGGCACTG TTTCCAGGTG TCGCATCACT ACGACGTGCC GTGCGACCAG
GCCGGCGAGC ATTGCCCGAT GAAGCAGGCG CTCGAGTCGC GCGGGCTGAA CCGCGTGCTG
CACATCCATC ACACGCCGCG CGGCCCCGAG CATGTCGACG TTGAGCTGCG GCCGATCTTC
GATGCACACG GCAACGTGAT CGCGTACGTC GAGCGGCTGA CGACCGTGCG CAGCGCGTCC
GCGCAGCCGA GCGCGGAAGG GCTCGTCGGC GGCTCCGATG CGTTCAACGC GGCGCTCGGC
GCGTTGCAGC GCGTGGCGCC GTCGACACTG CCGGTGTTGC TGCTCGGCGA ATCGGGCACC
GGCAAGGAGC TGTTTGCCCG CGCGCTGCAC GAGGCGAGCG ACCGCGCGAT GGGGCCGTTC
GTCGTCGTCG ATTGCTCGGG GATCGCCGAG ACGCTGTTCG AGAGCGAACT GTTCGGCTAC
GAGAAGGGCG CGTTCACCGG CGCGAACCGG CGCAAGCCGG GCCTCGTCGA AACCGCGCAG
GGCGGCACGC TGTTTCTCGA CGAGATCGGC GACGTGCCGC TGCCGATGCA GGTGAAGCTG
CTGCGGCTGA TCGAATCGGG CACGTTCCGG CGCGTGGGCG GCGTCGAGGC GCTGCGTGCG
GATTTCCGGC TGGTCGCGGC CACGCACAAG CCGCTGCGCG AGATGATCGA CGACGGTCGG
TTCCGGCAGG ATCTTTACTA CCGGATCAAC GCGTTTCCGA TCCCGCTGCC GGCGCTGCGC
GAACGGCAGG GCGACGTCGC GCTGCTGGCT GAATCGATCC TGCGGCGGAT CGCAAACGCG
CGCGGCAAGG CGGGCGACGC GAGTGCGCGG CCGTTCATGC TGACCGAGCG CGCAAGAGCG
TGCCTCGACG CGTATGCATG GCCCGGCAAC ATCCGCGAGC TGCGCAACGT GCTCGAACGC
GCGTGCCTGT TCGCCGACGA CGGGACGATC CGCGTCGAGC ATCTGCCGGC CGAACTCGTC
GCGGCAGCGG CGGCGCCCCA CGCGCAAGCG GCGGACGTGC GCGGCGTGTC GGATGCCGAG
CTGGTTCGTA TCGCGCGCAC GTTCGACGGC ACGCGCAAGG CGCTGGCCGA GCAACTCGGA
TTGAGCGAGC GGACACTGTA CCGGCGGATG AAGGCGCTAG GCCTCGGCTC GCGCGAGCGC
TGA
|
|---|
| Protein sequence | MNPHDTIPIV PVPRRDAMPD VRALVAYLEQ DPQPMIVVDP DYRILAANDA YRRQFGVAGV
EHVGRHCFQV SHHYDVPCDQ AGEHCPMKQA LESRGLNRVL HIHHTPRGPE HVDVELRPIF
DAHGNVIAYV ERLTTVRSAS AQPSAEGLVG GSDAFNAALG ALQRVAPSTL PVLLLGESGT
GKELFARALH EASDRAMGPF VVVDCSGIAE TLFESELFGY EKGAFTGANR RKPGLVETAQ
GGTLFLDEIG DVPLPMQVKL LRLIESGTFR RVGGVEALRA DFRLVAATHK PLREMIDDGR
FRQDLYYRIN AFPIPLPALR ERQGDVALLA ESILRRIANA RGKAGDASAR PFMLTERARA
CLDAYAWPGN IRELRNVLER ACLFADDGTI RVEHLPAELV AAAAAPHAQA ADVRGVSDAE
LVRIARTFDG TRKALAEQLG LSERTLYRRM KALGLGSRER
|
|---|
| |