| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6331 |
|---|
| Symbol | |
|---|
| ID | 4097356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 946597 |
|---|
| End bp | 947418 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638019620 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_626167 |
|---|
| Protein GI | 107029072 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.949038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGA ATCGCTACCT GCAGTTCGCG GCGCTGTTCG TCGGTTTCGC GTTCCTGTAC
ATCCCGATCA TCAGCCTGAT CGTCTATTCG TTCAACGAGT CGAAGCTCGT CACCGTGTGG
TCGGGCTTCT CGTTCCGCTG GTACGCGGCG CTCGTCGAGG ACGACGAGCT GCTGACGGCC
GCGTGGCTGT CGCTGAAGAT CGGCGTGCTG ACCGCGTTTG CGTCGGTGTT CATCGGCACG
TGGGCCGGCT TCGTGCTCGC ACGGATGGGA CGCTTTCGCG GCTTCGCGCT GTTCAGCGGG
ATGATCAACG CGCCGCTCGT GATTCCCGAG GTGATCCAGG GGATCTCGCT GCTGCTGCTG
TTCATCGAGC TCGCGAAGTG GATCGGCTGG CCGGCCGAGC GCGGCGTGTT CACGATCTGG
CTCGGCCACG TGATGCTGTG CATCTCGTAC GTCGCGATCA TCGTGCAGTC GCGCGTGCGC
GAGCTGAATC CGTCGCTGGA AGAGGCCGCG CTCGATCTCG GCGCGACCCC GCTGAAGGTG
TTCTTCACGA TCACGCTGCC GCTGATCTCG CAGGCGCTGA TCGCGGGCTG GCTGCTGTCG
TTCACGCTGT CGATCGACGA TCTGGTGCTA TCGGCGTTCC TGTCGGGCCC CGGCTCGACG
ACGCTGCCGC TCGTCGTGTT CTCGCGCGTG CGCCTTGGCC TGAACCCGGA GATGAACGCG
CTCGCGACGC TGTTCATCAT CGCGGTGACG GCCGGCGTCG TGATCGCGAA CTTCGTGATG
CTGCGTCAGG AGCGCAAGCG GCTGGCGGGG TTCGCGGCCT GA
|
|---|
| Protein sequence | MKPNRYLQFA ALFVGFAFLY IPIISLIVYS FNESKLVTVW SGFSFRWYAA LVEDDELLTA
AWLSLKIGVL TAFASVFIGT WAGFVLARMG RFRGFALFSG MINAPLVIPE VIQGISLLLL
FIELAKWIGW PAERGVFTIW LGHVMLCISY VAIIVQSRVR ELNPSLEEAA LDLGATPLKV
FFTITLPLIS QALIAGWLLS FTLSIDDLVL SAFLSGPGST TLPLVVFSRV RLGLNPEMNA
LATLFIIAVT AGVVIANFVM LRQERKRLAG FAA
|
|---|
| |