Gene Bcen_6300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6300 
Symbol 
ID4096731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp913436 
End bp914617 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID638019589 
Productcystathionine beta-lyase 
Protein accessionYP_626136 
Protein GI107029041 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01324] cystathionine beta-lyase, bacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0676411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCAT CCACTTCCAA GCGCGCGCTG CAAACCCGCA TCGTTCAACC CGACGACGTC 
ATTCCGGAAG GCTTCCGCTC GTTCGTGCCG CCGGTCGCGC GCGCATCGAC GGTCGTGTTT
CCCGATCTCG CGACGATGCG CGCGCTGGTC TGGCACGACG ACAACCAGTG GCGCTACGGG
CTGCATGCGA CGCCGACGTC GCTCGCGCTC GCGCAGCGGC TCGCCGAGAT CGAGGGCGGC
ACGCACGCGC TGCTGCAGCC GTCGGGTCTC GCGGCGATCA TGAACGTCTA CTTCGGGATC
GTGAAAGCGG GCGACGACGT GCTGGTTCCG CATAACGTAT ACGGCCCGAA CGCCGATTTC
GGCAATTGGC TCGCGAACGA TTTCGGCATT ACCGTGCGTT TTTACGATCC ATTGATCGGC
GCCGGCATCG CCGAGCTGAT CCAGCCGAAC ACGCGGCTGA TCTGGCTCGA GGCGCCGGGC
TCGGTGACGA TGGAAGTGCC CGACGTGCAC GCGATCACGG CGGCCGCGAA GGCGCGCGGC
ATCGTCACCG CGATCGACAA CACCTTTTCG GCGGGGCTCG CGTTCAAGCC GTTCGAGCAC
GGCGTCGACA TTTCGGTGCA GGCGCTGACC AAGTATCAGT CGGGCGGCAG CGACGTGCTG
ATGGGCGCGA CGATCACCGC GAACGCGGAA CTGCACGCGA AGCTGAAGCT CGCGCGGATG
CGCTGCGGAA TCGGCGTGTC GGTCGACGAT TGCTCGCTCG TGCTGCGTAG CCTGCCGAGC
ATGCAGGTGC GCTTCGATGC GCACAGCAAG AGCGCGCTCG CGCTCGCGCA ATGGCTGAAG
GCGCGGCCGG AGATCGCCGC GGTGCTGCAT CCGCAGATCG CCGACTGCCC GGGGCACGCG
TCGTTCATGC GCGATTTCAA GGGTGCGGGC GGGCTGTTCT CGGTGGTATT CGACGAACGC
TACAGCGCGG AGCAGGTCGA CCGTTTCGTC GAGTCGCTCG AGCTGTTCGC GATCGGCTGG
AGCTGGGGCG GCGCGTGCAG CCTCGCGATG CCTTACGACG TCGCGTCGAT GCGTCCGGAC
TGGCCGCATC GCGGCACGCT GGTGCGTTTC TACGTGGGTC TGGAAGACGA AGCCGACCTG
CGCGCGGACA TCGAGCGCGC GATGCAGGCC GCGCTGGGCT GA
 
Protein sequence
MTASTSKRAL QTRIVQPDDV IPEGFRSFVP PVARASTVVF PDLATMRALV WHDDNQWRYG 
LHATPTSLAL AQRLAEIEGG THALLQPSGL AAIMNVYFGI VKAGDDVLVP HNVYGPNADF
GNWLANDFGI TVRFYDPLIG AGIAELIQPN TRLIWLEAPG SVTMEVPDVH AITAAAKARG
IVTAIDNTFS AGLAFKPFEH GVDISVQALT KYQSGGSDVL MGATITANAE LHAKLKLARM
RCGIGVSVDD CSLVLRSLPS MQVRFDAHSK SALALAQWLK ARPEIAAVLH PQIADCPGHA
SFMRDFKGAG GLFSVVFDER YSAEQVDRFV ESLELFAIGW SWGGACSLAM PYDVASMRPD
WPHRGTLVRF YVGLEDEADL RADIERAMQA ALG