| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6270 |
|---|
| Symbol | |
|---|
| ID | 4097115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 880143 |
|---|
| End bp | 881288 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638019560 |
|---|
| Product | Pyrrolo-quinoline quinone |
|---|
| Protein accession | YP_626107 |
|---|
| Protein GI | 107029012 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1520] FOG: WD40-like repeat |
|---|
| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.729477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGC TGAAACGTTA CGCTGTGCCC GTTGCCTGCG CGGCGGCTGT CCTCGCTTTG
ACGGCTTGCT CGTCGTCGAA GGATGCGCGC CGCGTGCCGA CGCCGCTCAC CGAGTTCAAG
CCCGTCATGG ACGTGCAACA GGTCTGGAAG GCGAGCGTCG GCAAGGGCGG ACGCTACCTG
TTCTCGCCGG TGGCCGTGGG CGACGCGGTC TATGCGGCGG GCGAAAACGG TGCGGTCGAG
AAGATCGACG CGAAGACGGG CCAGACGCTG TGGCGCTCGA AGGTCGGTTC GGACCTGTCG
GCCGGTGTCG GCAGCGACGG CAACCTGACC GCGGTCGGTG CGTTGAAGGG CGGCGTGTTC
GTGCTGGGCC CGGACGGCAA GCAACTGTGG AAGACCAGCG TGCAGGGCGA GATCTTCTCG
CCGCCGCTCG TCGGCAACGG CCTCGTGGTC GTCCGCACGA TCGACGGCCA AGTGATCGCG
TTCAACGCGC AGACGGGCGA GCAGAAGTGG AACTACCGCA ACCGAGCGGT GCCGCTGAAC
CTGCGCGTGT CGGCGGGCAT GACGTTCGCG GGCGACGCGG CCGTGCTCGC GGGCTTCCCG
GGCGGCGGTC TGGTCGCGAT CAACCTGCAG ACGGGCGAGC CGTTCTGGCA AACCCCGGTG
TCGTTCCCGA AGGGCGTGAC CGAAGTCGAG CGCATCAACG ACGTCAGCGG CCCGCCGACG
CTCGTGGGCG CGGAAGCCTG CGCGGTGACG TTCCAGGGGC AGCTCGGCTG CTTCGATGCA
AACTCGGGCC GGCCGCTGTG GGAAAAACCG TTCTCGAGCC GCAGCGGCCT TGCGCAGGAC
GATTCGGTGG TCGCCGGCGG CGACGACTGG TCGGTCGTCA CCGCGTACGA TGCGGCCACG
GGCAATCAGC TCTGGCGCAA CGACAAGCTG AAGAGTCGTG ACGTCGGCGT GCCGTACCTG
CTCGGGCACG CGGTCGTGAT GGGCGATTAC AAGGGCTTCG TGCACTTCCT GTCGCGCGAG
GACGGCAGCT TCATCGCACG GATGAAGACC GACGGCAGCG CGATTACGGC AGCGCCGGTC
CTCGCGGGCA ACACGCTCGT CGTGCAGACG AAGGACGGCG GCCTGTACGG GTTCCGTCCG
CGCTGA
|
|---|
| Protein sequence | MNLLKRYAVP VACAAAVLAL TACSSSKDAR RVPTPLTEFK PVMDVQQVWK ASVGKGGRYL
FSPVAVGDAV YAAGENGAVE KIDAKTGQTL WRSKVGSDLS AGVGSDGNLT AVGALKGGVF
VLGPDGKQLW KTSVQGEIFS PPLVGNGLVV VRTIDGQVIA FNAQTGEQKW NYRNRAVPLN
LRVSAGMTFA GDAAVLAGFP GGGLVAINLQ TGEPFWQTPV SFPKGVTEVE RINDVSGPPT
LVGAEACAVT FQGQLGCFDA NSGRPLWEKP FSSRSGLAQD DSVVAGGDDW SVVTAYDAAT
GNQLWRNDKL KSRDVGVPYL LGHAVVMGDY KGFVHFLSRE DGSFIARMKT DGSAITAAPV
LAGNTLVVQT KDGGLYGFRP R
|
|---|
| |