Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6267 |
Symbol | ispG |
ID | 4097112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 876736 |
End bp | 878052 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638019557 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_626104 |
Protein GI | 107029009 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTAT CGATGCAATC CGAAGCTCAA TCCCCACGCA GCAGTCAGAT TTGTTCAACC GAGCCGGTGT TCGGCGGGCA TCAGCCGCGC CGCGTATCGC ATGCGGTGGA TGTCCGCTGG GGCGGGCAAC TCGTGACGAT CGGCGGCGAC GCGCCGGTGC GCGTGCAGTC GATGACGAAT ACCGACACGG CCGATGCGAT CGGCACGGCG ATCCAGATCA AGGAACTCGC GAATGCGGGC TCCGAGCTGG TGCGCATCAC GGTCAACACG CCCGAAGCCG CGGTCGCCGT GCCGGCGATC CGCGAGCAGC TCGACCGGAT GGGCGTGACC GTGCCGCTCG TCGGCGATTT CCACTACAAC GGCCACCTGC TGCTGCGCGA CTATCCGGGC TGCGCCGAGT CGCTGTCGAA GTACCGGATC AACCCCGGTA ACGTCGGTCA GGGTGCGAAG CGCGACACGC AGTTCGCGCA GATGATCGAG GCCGCGGCGA AGTACGACAA GCCGGTGCGG ATCGGCGTGA ACTGGGGCAG CCTCGACCAG GACCTGCTCG CACGCATGAT GGACGAGAAC GGCGCGCGCG CGCAGCCGTG GGACGCGCAG AGCGTGATGT ACGAGGCGCT GATCCAGTCG GCCATCGGCT CGGCCGAACG CGCGGTCGAG CTCGGCCTCG GCCGTGACCG CATCGTGTTG TCGTGCAAGG TCAGCGGCGT GCAGGACCTG ATCGCCGTGT ACCGCGAACT CGGCCGCCGC TGCGGCTTCG CGCTGCACCT CGGGCTGACC GAGGCCGGCA TGGGTTCGAA GGGCATCGTC GCGTCGACGG CGGCGCTCGG CGTGTTGCTG CAGGAAGGGA TCGGCGACAC GATCCGCATC TCGCTGACGC CGGAGCCGGG CGCGTCGCGC ACCGGCGAGG TGATCGTCGG CCAGGAAATC CTGCAGACGA TGGGCCTGCG CTCGTTCGCG CCGATGGTGA TCGCGTGCCC GGGCTGCGGC CGCACGACGA GCACGCTGTT CCAGGAGCTC GCGATGCAGA TCCAGACCTA CCTGCGCGAG CAGATGCCGG TCTGGCGCAA GGAATATCCG GGCGTCGAGA AGATGAACGT CGCGGTGATG GGCTGCATCG TCAATGGCCC GGGCGAATCG AAGCACGCGA ACATCGGCAT CAGCCTGCCG GGTTCGGGCG AGAACCCGGC CGCACCCGTC TTCATCGACG GCGAGAAGGT CAAGACGCTG CGCGGCGAGC GGATCGCCGA GGAATTCCAG CAGATCGTCA GCGACTACGT CGCACGCAAT TACGGCCGCA CCGAGGCCCT GAACTAA
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Protein sequence | MDLSMQSEAQ SPRSSQICST EPVFGGHQPR RVSHAVDVRW GGQLVTIGGD APVRVQSMTN TDTADAIGTA IQIKELANAG SELVRITVNT PEAAVAVPAI REQLDRMGVT VPLVGDFHYN GHLLLRDYPG CAESLSKYRI NPGNVGQGAK RDTQFAQMIE AAAKYDKPVR IGVNWGSLDQ DLLARMMDEN GARAQPWDAQ SVMYEALIQS AIGSAERAVE LGLGRDRIVL SCKVSGVQDL IAVYRELGRR CGFALHLGLT EAGMGSKGIV ASTAALGVLL QEGIGDTIRI SLTPEPGASR TGEVIVGQEI LQTMGLRSFA PMVIACPGCG RTTSTLFQEL AMQIQTYLRE QMPVWRKEYP GVEKMNVAVM GCIVNGPGES KHANIGISLP GSGENPAAPV FIDGEKVKTL RGERIAEEFQ QIVSDYVARN YGRTEALN
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