Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6259 |
Symbol | |
ID | 4097399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 868445 |
End bp | 869533 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638019549 |
Product | RNA polymerase sigma factor RpoS |
Protein accession | YP_626096 |
Protein GI | 107029001 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.295107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAAT CGAAGCGCCA CGAGCCGCAA GCCGAGTCTG AGAAGATCAG TCGTGCCACG CAAGCATCGG TGGGGCGAGT GGGTGCTTCG ACGGACGACG AAGAGGATGT CGCGGAAAAC GAACGTGATC TCGAGGCACG CGACGCCGAC GCGGACGGTG GCGACGACGA GCGCGAAGGC CGCCAGGAAG CCGCGCCCGA CGTCGACGAT TTCCGCACGC TGCTGCAGGC CGAGCTCACG GCCGACACGA TCCAGCATTA CCTGAACCGC ATCAGCGTGA AGCCGCTGCT GACCGTCGAG GAAGAGCAGC GTTATTCGCG TCTCGCGAAG GCCGGCGAAT TCGAGGCGCG GCAGGTGATG ATCGAGCGCA ATCTGCGGCT CGTCGTCAGT ATCGCGAAGG GCTACCTGAA CCGCGGCGTG CCGCTGCTCG ACCTGATCGA GGAAGGCAAC CTCGGCCTGA TGCACGCGAT CGAGAAATTC GACCCGACGC GCGGTTTCCG TTTCTCGACC TACGCGACGT GGTGGATCCG GCAGAGCATC GAGCGGGCGA TCATGAATCA GGCCCGCACG GTGCGCCTGC CCGTGCACGT GATCCGCGAA CTGAACCAGG TGCTGCGCGC GAAGCGCCAC CTCGAAAAGA ACTCGATGTC GACGGGCGAA GCGGCCGAAC GCCGCGAAGC CAGCATCGAC GACATCGCCT ATCTCACCGG CAAGACCGCC GAGGAAGTCA CCGATATCCT CGCGCTCAAC GAGCACACGG CGTCACTCGA TGCGCCGCTC GACCCCGATC CCGCGAGCAG CCTGCTCGAC CTGCTGCCCG ACGACCAGAG TCAGTCGCCC GACGCCGAGG TGCAGCACCG CGAGCTCGAA ACGCTGACGC GCGCGTGGCT GTCGCGTCTG TCCGACAAGC ACCGGCACGT GATCGAGCGC CGCTTCGGTC TGAACCACAT CGAACCGGCG ACGCTCGAGG AGCTCGCCGA CGAGATGGGG CTCACGCGCG AACGCGTGCG GCAGATCCAG CAGGAAGCGC TGGTGCGCCT CAAGCGGTTC TTCGCCTCCA ACGGCGTGCG CAAGGACGCC GTTCTGTAA
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Protein sequence | MPKSKRHEPQ AESEKISRAT QASVGRVGAS TDDEEDVAEN ERDLEARDAD ADGGDDEREG RQEAAPDVDD FRTLLQAELT ADTIQHYLNR ISVKPLLTVE EEQRYSRLAK AGEFEARQVM IERNLRLVVS IAKGYLNRGV PLLDLIEEGN LGLMHAIEKF DPTRGFRFST YATWWIRQSI ERAIMNQART VRLPVHVIRE LNQVLRAKRH LEKNSMSTGE AAERREASID DIAYLTGKTA EEVTDILALN EHTASLDAPL DPDPASSLLD LLPDDQSQSP DAEVQHRELE TLTRAWLSRL SDKHRHVIER RFGLNHIEPA TLEELADEMG LTRERVRQIQ QEALVRLKRF FASNGVRKDA VL
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