Gene Bcen_6252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6252 
Symbol 
ID4097392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp860959 
End bp863322 
Gene Length2364 bp 
Protein Length787 aa 
Translation table11 
GC content71% 
IMG OID638019542 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_626089 
Protein GI107028994 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.554361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTATC AAGTTCTCGC ACGCAAGTGG CGTCCGAAGG ATTTCGCTTC GCTCGTCGGC 
CAGGAGCACG TCGTCAGGGC GCTCACGCAC GCGCTCGACG GCGAGCGTCT CCATCACGCC
TATCTGTTTA CCGGAACCCG CGGTGTCGGC AAGACGACGC TGTCGCGGAT CTTCGCGAAG
GCGCTCAACT GTGAAACCGG CGTCACGTCG CAGCCGTGCG GCGTGTGTCG TGCCTGTCGC
GAGATCGACG AGGGCCGTTT CGTCGATTAC GTCGAGATGG ACGCGGCGAG CAATCGCGGC
GTCGATGAAA TGGCCGCGCT GCTCGAGCGC GCGGTGTACG CGCCCGTCGA TGCGCGCTTC
AAGGTCTACA TGATCGACGA AGTGCACATG CTGACGAATC ACGCGTTCAA CGCGATGCTG
AAGACGCTCG AAGAGCCGCC GCCGCACGTC AAGTTCATCC TCGCGACGAC CGATCCGCAG
AAAATCCCCG TGACTGTGCT GTCGCGCTGC CTGCAGTTCA ACCTGAAGCA GATGCCGGCC
GGGCACATCG TGTCGCATCT CGAGCGGATC CTCGGCGAAG AGCAGATCAC GTTCGAGCCG
CAGGCGCTGC GCCTGCTCGC GCGCGCCGCG CAGGGCAGCA TGCGCGACGC GCTGTCCCTG
ACCGACCAGG CGATCGCCTA TTCGGCGAAC GAGGTGACCG AGTCGGCGGT GTCGGGCATG
CTCGGCGCGC TCGACCAGAC ATACATGGTG CGCCTGCTCG ACGCGCTCGC GGCGGCCAAT
GGCCCGGAAA TCCTCGCGAT TGCCGACGAG ATGTCGTTGC GCAGCCTGTC GTTCTCGACC
GCGCTGCAGG ATCTCGCGAG CCTGCTGCAC CGGATCGCCT GGGCGCAGTT CGCGCCGGGC
TCGGTGCTCG ACGAATGGCC GGAAGCGGCC GACCTGCGTC GTTTTGCGGA GACGCTGAGC
CCCGAGCAGG TGCAATTGTT CTATCAGATC GCGACGGTCG GGCGCGCCGA GCTTGGCCTT
GCGCCCGACG AATACGCCGG TTTCACGATG ACGCTGCTGC GGATGCTCGC ATTCGAGCCG
GCCGTTGGCG CCGGCAGCGC GCCGGGCGGC CAGCCGTCCG TGCCGCCGCG TGCGGTGCCG
GCCCCGCGTG CTGCCGCGGC GAAGCCGGTG TCGGCCACGC CCGCCGGCGC AGCGCGTCCG
CAAGCTGCGG TGCCGGCTGC ACCGGTTGCG CCGGTCGCCC GTTCGGCGCC CGCGCAGTCA
AGCGATGAAG CCGAACGGCC GGCCGCCAAG CCGCCTGCCG CCCAGTCACC GGCAGAGGCT
GCAGCCTCGG TACCGACAGC GGTCGACGCA CAAGCGATCG AGGAGCCGTC GCAGCCGGAA
ACGAAGGCGG CGCCCGCTGG CGACGTGCCG CCTCCCGCCC GGAAGGAACC CGAGCCGCCT
GCCGTTGCCG CCGTGCAGCG AAACGACGAA CCGGCTCCGC AGGCCGAACC GGCGCCGCGC
GCCGCATCGC CCGAGCCGGC CGCCGCACGG CCGGCGGCGC GCGCAGGCGG TGCCGCCGCC
GCGCTCGACG TGCTGCGCAA TGCGGGGATG CGCGTGTCGT CGGACCGCGG CGGGCGCGCA
GGCGCAACAG CCAAACCGGC GGCGGCCCAG CCGGCCGCCG AGAAGCCGGC CGCGCCGCGT
CCGGCCGTCC AGGTGCCGAC GCCGCGTGCC GCTGCCCGCG CGCCGCAAGC AGCCGAGTCG
CGCCAGCCGT CGCCGCCGTG GGAAGACATC CCGCCCGACG ACTACGTGCC GCTCAGCGCC
GACGAAATGT TCGGCGGTTC CGACGACGGC TTCGTGCCGG TGTTCGACAG CGGTCCCGAC
GATGTGCGCG TGACGCCGAA GCCGGCGGAC GCGCGTCCGG CCGCGCCGAT CGACACGCGG
CCGCTGCCGC CCGCGATCGC GCTCGATCCG ATCGGCTTCG ACGGCGAATG GCCGGCGCTC
GCCGCACGGC TGCCGCTGAA GGGCGTCGCG TACCAGCTCG CGTTCAACAG CGAGCTGACG
GCCGTCGATG CGGGCACATT GAAACTGTCC GTGCCGGTGC CGCAGTATGC GGACGCCGCG
CAGGTGACGA AGCTGAAGGC CGCACTGGCC GATGCGCTCG GCAAGCCGGT CGAGGTGAGC
GTCGAGGTCG GGCCCGCACG GCGCACCGCG GCGGCGCTCG ATGCGGCCGC GCGCGCGGCG
CGCCAGCGCG AAGCCGAGCA GGAGATTCAC GGCGATCCGT TCGTCCAGCA GCTCGTGCGC
GACTTCGGTG CGCGCATCGT CGAGGGGTCG GTGCGTCCGC TCGCCGATTC GGCGCCGGAC
GGTGTGCCGC CCACACTCCA TTGA
 
Protein sequence
MTYQVLARKW RPKDFASLVG QEHVVRALTH ALDGERLHHA YLFTGTRGVG KTTLSRIFAK 
ALNCETGVTS QPCGVCRACR EIDEGRFVDY VEMDAASNRG VDEMAALLER AVYAPVDARF
KVYMIDEVHM LTNHAFNAML KTLEEPPPHV KFILATTDPQ KIPVTVLSRC LQFNLKQMPA
GHIVSHLERI LGEEQITFEP QALRLLARAA QGSMRDALSL TDQAIAYSAN EVTESAVSGM
LGALDQTYMV RLLDALAAAN GPEILAIADE MSLRSLSFST ALQDLASLLH RIAWAQFAPG
SVLDEWPEAA DLRRFAETLS PEQVQLFYQI ATVGRAELGL APDEYAGFTM TLLRMLAFEP
AVGAGSAPGG QPSVPPRAVP APRAAAAKPV SATPAGAARP QAAVPAAPVA PVARSAPAQS
SDEAERPAAK PPAAQSPAEA AASVPTAVDA QAIEEPSQPE TKAAPAGDVP PPARKEPEPP
AVAAVQRNDE PAPQAEPAPR AASPEPAAAR PAARAGGAAA ALDVLRNAGM RVSSDRGGRA
GATAKPAAAQ PAAEKPAAPR PAVQVPTPRA AARAPQAAES RQPSPPWEDI PPDDYVPLSA
DEMFGGSDDG FVPVFDSGPD DVRVTPKPAD ARPAAPIDTR PLPPAIALDP IGFDGEWPAL
AARLPLKGVA YQLAFNSELT AVDAGTLKLS VPVPQYADAA QVTKLKAALA DALGKPVEVS
VEVGPARRTA AALDAAARAA RQREAEQEIH GDPFVQQLVR DFGARIVEGS VRPLADSAPD
GVPPTLH