Gene Bcen_6241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6241 
Symbol 
ID4097285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp848645 
End bp849649 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID638019531 
Producttransketolase, central region 
Protein accessionYP_626078 
Protein GI107028983 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGGA AGATCACTTA TTCGCAGGCG ATCAACGAGG CGCTCGCGCA GGAAATGGCG 
CGCGACGACA GCGTGATCGT GATGGGCGAG GACAACGCGG GCGGTGCGGG CGCGCCGGGC 
GAGGACGACG CATGGGGCGG CGTGCTCGGC GTGACGAAGG GGCTGTTCCA CAAGTTTCCG 
GGCCGCGTGC TCGATACGCC GCTGTCGGAG GGCGGCTACA TCGGCGCGGC GGTCGGCGCC 
GCCGCGTGCG GGATGCGTCC CGTCGCGGAA CTGATGTTCA TCGATTTCAT GGGCGTGTGT 
TTCGACCAGA TCTTCAACCA GGCCGCGAAA TTCCGCTACA TGTTCGGCGG CAAGGCCGTG 
ACGCCGGTCG TGATCCGCGC GATGTACGGC GCCGGCCTGC GCGCGGCCGC GCAGCACTCG 
CAGATGCTCA CGTCGCTGTT CACGCATATC CCGGGGCTGA AGGTCGTGTG CCCGTCGACG 
CCGTACGACG CGAAGGGGCT GCTGATCCAG GCGATCCGCG ACAACGATCC CGTGATCTTC 
CTCGAACACA AGCTGCTCTA TACGCGTGAG GGCGACGTCC CGGAGGAATC CTATGCGATT 
CCGTTCGGCG AGGCGAACGT GCTGCGCGAC GGCGACGACG CGACGATCGT CACGTACGGC 
CGGATGGTGC ATCTCGCGAT GGACGCGGCC GCGACGCTCG CGAAGGGCGG CATCCAGTGC 
GACGTGATCG ACCTGCGCAC GACGTCGCCG CTCGACGAGG AAACGATCCT CGAAAGCGCG 
GCGCGCACCG GGCGCGTGGT GGTGGTCGAC GAAGCGAATC CGCGCTGCTC GATCGCGACC 
GACATCGCCG CGCTCGTCGC GCAGCGCGCG TTCCGGTCTC TGAAGGCGCC GATCGAGCTC 
GTCACCGCGC CGCATACGCC CGCGCCGTTC GCCGGCGTGC TGGAAGACCT GTATATCCCG 
TCCGCCGATG CAATTGCGCA GGCGGTACTC AAGACGAGGA GCTGA
 
Protein sequence
MARKITYSQA INEALAQEMA RDDSVIVMGE DNAGGAGAPG EDDAWGGVLG VTKGLFHKFP 
GRVLDTPLSE GGYIGAAVGA AACGMRPVAE LMFIDFMGVC FDQIFNQAAK FRYMFGGKAV 
TPVVIRAMYG AGLRAAAQHS QMLTSLFTHI PGLKVVCPST PYDAKGLLIQ AIRDNDPVIF 
LEHKLLYTRE GDVPEESYAI PFGEANVLRD GDDATIVTYG RMVHLAMDAA ATLAKGGIQC 
DVIDLRTTSP LDEETILESA ARTGRVVVVD EANPRCSIAT DIAALVAQRA FRSLKAPIEL 
VTAPHTPAPF AGVLEDLYIP SADAIAQAVL KTRS