Gene Bcen_6198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6198 
Symbol 
ID4096898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp804187 
End bp804657 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID638019488 
ProductLysM domain/BON superfamily protein 
Protein accessionYP_626035 
Protein GI107028940 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0206564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCTTC TTTCGTTTAT TAAAGAGGCG GGTGAAAAAC TGCTGGGTCA CGCCGATGCG 
CAAGCAGCGG AAGATCCGAA TGCCGCGAAC CAGACTGCGG CCGACGCAAT CAAGAATTAC 
ATCAGCTCGC AAGGTCTCGA TACGTCGAAC CTGACCGTCG CGTTCGACGG CGCATCGCGC 
ACCGTCACGC TGTCGGGCAG CGTCGCCGAT CTCGACACGA AGGCGAAGGT CAAGGTCGCG 
GCCGGCAACG TGCAGGGTGT CGCGGGCGTC AACGATGACG ATCTGCAGCC GGACGATCCG 
GAAGTGCAGT ACCACGACGT GAAGCCGGGC GACACGCTGT CGGCGATCGC CAAGGAAGTG 
TACGGCGATG CGAACAAGTA TCCGGTGATC TTCGAAGCGA ACAAGCCGAT GCTGTCGAGC 
CCGGACCGGA TCTACCCGGG CCAGAAGCTC GTGATTCCGC CGCAGTCCTG A
 
Protein sequence
MGLLSFIKEA GEKLLGHADA QAAEDPNAAN QTAADAIKNY ISSQGLDTSN LTVAFDGASR 
TVTLSGSVAD LDTKAKVKVA AGNVQGVAGV NDDDLQPDDP EVQYHDVKPG DTLSAIAKEV 
YGDANKYPVI FEANKPMLSS PDRIYPGQKL VIPPQS