Gene Bcen_6188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6188 
Symbol 
ID4096888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp794999 
End bp795778 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID638019478 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_626025 
Protein GI107028930 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.154471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGTCG ACTCTCACTG CCACATCAAT TTCAAGGGCC TGGCCGACCG CCTGCCGGCC 
GTTCTCGAGA ACATGCGCGA GCACGACGTC ACGCATGCGC TGTGCGTGTC TGTCGATCTC
GAGACGCTGC CCGAGGTGCT TGCGATCGCC GAAGCGCACG ACAACGTGTA CGCATCGGTC
GGCGTGCATC CCGATCACGA GGACATGCGC GAGCCGACGC TCGCGGAGCT GGTCGAGCTG
GCCGCGCACC CGAAGGTCGT CGCGATCGGC GAAACCGGCC TCGACTACTA TCGCCTCGAA
GGGCGCTCGA TCGCCGACAT GGAATGGCAG CGCGAACGTT TTCGCACGCA CATTCGCGCG
GCGACCGCGA CGATGAAGCC GCTGATCATC CACACGCGTT CGTCGTCGGA AGACACGCTG
CGGATCATGG CCGAGGAGCG CGCGGACGTG CCGGGCGGCG TGATGCACTG CTTCACCGAG
CCGTGGCCGG TCGCCGAGCA GGCGCTCGCG CAGAACTTCC ATATCTCGCT GTCGGGCATC
GTCACGTTCA AGAACGCGAC CGACGTGCAG GACGTCGCGC GGCGCGTGCC GCTCGACCGG
CTGCTGATCG AGACCGACTC GCCGTACCTC GCGCCGGTGC CGTATCGCGG CAAGCCGAAT
GAACCTGCGT ACGTCAGCCA TGTCGGACGC TTTATCGCAT CCGAGCGCGG TGTCGCCGTC
GAGGCGCTCG CCGATGCGAC GACGCAGAAC TTTTTCCGGC TGTTCAAGAT CGCCCGCTAA
 
Protein sequence
MFVDSHCHIN FKGLADRLPA VLENMREHDV THALCVSVDL ETLPEVLAIA EAHDNVYASV 
GVHPDHEDMR EPTLAELVEL AAHPKVVAIG ETGLDYYRLE GRSIADMEWQ RERFRTHIRA
ATATMKPLII HTRSSSEDTL RIMAEERADV PGGVMHCFTE PWPVAEQALA QNFHISLSGI
VTFKNATDVQ DVARRVPLDR LLIETDSPYL APVPYRGKPN EPAYVSHVGR FIASERGVAV
EALADATTQN FFRLFKIAR