| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6178 |
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| Symbol | |
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| ID | 4096532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | + |
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| Start bp | 785923 |
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| End bp | 787401 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638019468 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_626015 |
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| Protein GI | 107028920 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.837587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCCCC GTCGGACTGC CCCTTACGTC ATCGTGGCAA TTGCTTCCAT GATCGCGTGC
GCGCTCATGG CGCTATGCGT GCTGCAACTC TTGCAGAGCC GCGACGACGC GATGGAGCGT
GCAAGGGAAA CGTCACGCAA CCTCGGACTT GTCGCCGAGC GCGACATCGA ACGCAATTTC
GAGTTGTACG ACCTGTCTTT GCAGGCCGTC ATCCATGGGT TGCAGCGCCG CGATGTGATG
GACGCTTCGC CCAGCTTGCG CCGTGCCGTG CTGTTCGATC ACGCGATGAC CGCGGAATTT
CTCGGTTCGA TGCTCGTGAT GGATGCAGGC GGCAATATCG TCCTGGATTC GGGCTATGAC
GAGCCGCGCA AGGGCAATTT CGCCGATCGC CGATACTTCA CGATCCACCG CGACAATCCG
AACGTCGGAC TCTATGTCAG TGACCCATTC GTATCCCGTT TGCGGGGAGG CATGCTCAGT
ATCGCGCTTA CGCGGCGGAT TTCGAACCCC GATGGATCGT TTGGCGGCAT TGCCGTTATT
GCGGTCAATC TTGAATATTT TCATCAGCTC TTCGCCGGGC TTTCGCTTGG CAAACATGGC
TCGATTTCGC TGATCGGCGA AGACGGCAAG ATGGTGATGC GTCAGCCGTA CGATGTGCAT
ACCATCGGCC GCGACCTCAG CAAGGCCGCA ACGTTCCGGC GTTTCCAGAC CGCGCGAGAG
GGCTCCTTCT CTGAAACCTC GTCGATCGAC GGCGTGCGCC GCCTCTACTA CTTCAAGCAT
TTGCCGAAAC TGCCGCTGAT CATCATGGTC GCGGAGGCCG AGCAGGACAT TTACGCCGCC
TGGCGGCAAC GTGCGATCAC GATCGGCGGA CTGGTCGCGA CGTTCGGGGT GGCGTTCATC
GCGCTGTCGC TGCTGCTCGG TTCGCAGCTG CGGCGCCGTA TGCGAGCCGA GTCGGAACTC
GTGCTGCTCG CCCGGACGGA CGGTCTCACC GGCCTGAGCA ATCGCCGCAG CTTTGGCGAG
GTACTGGACA ACGAGTGGCG TCGCGCCCGG CGTGCGCGTT CCGTTTTCTC GCTGCTGTTC
GTGGATGTGG ACCGGTTCAA GGCTTACAAC GACACGTACG GTCATCAGGC CGGGGACGAT
GCGTTGGCGG CGGTCGCGCG GTGCATCGGC GAGAACATTC GCCGGCCGGC CGATACGGCG
GCTCGTTATG GCGGGGAGGA GTTCGTCGTG TTGCTCCCCG ACACGTCGCA AACCGGCGCG
GCGCAGATCG CCGAGCGGAT TCGTGCGGCC ATCGACGAGT TGGCCCTCGA GCACGCTGGC
AGCGAATACG GGCGTGTTAC CGCGAGCATT GGCCTGGCGA GCTGGACGCC CGATCAGGAA
GGGCAGCCTG ATGCCGTGAT CAAGGCGGCT GATGAGGCGC TGTACTACGC GAAGGCGACT
GGTCGGAACA AGGTCGCCGC GTTGCAGCCG GCGGAGTGA
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| Protein sequence | MHPRRTAPYV IVAIASMIAC ALMALCVLQL LQSRDDAMER ARETSRNLGL VAERDIERNF
ELYDLSLQAV IHGLQRRDVM DASPSLRRAV LFDHAMTAEF LGSMLVMDAG GNIVLDSGYD
EPRKGNFADR RYFTIHRDNP NVGLYVSDPF VSRLRGGMLS IALTRRISNP DGSFGGIAVI
AVNLEYFHQL FAGLSLGKHG SISLIGEDGK MVMRQPYDVH TIGRDLSKAA TFRRFQTARE
GSFSETSSID GVRRLYYFKH LPKLPLIIMV AEAEQDIYAA WRQRAITIGG LVATFGVAFI
ALSLLLGSQL RRRMRAESEL VLLARTDGLT GLSNRRSFGE VLDNEWRRAR RARSVFSLLF
VDVDRFKAYN DTYGHQAGDD ALAAVARCIG ENIRRPADTA ARYGGEEFVV LLPDTSQTGA
AQIAERIRAA IDELALEHAG SEYGRVTASI GLASWTPDQE GQPDAVIKAA DEALYYAKAT
GRNKVAALQP AE
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