| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6176 |
|---|
| Symbol | |
|---|
| ID | 4096530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 781386 |
|---|
| End bp | 782786 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638019466 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_626013 |
|---|
| Protein GI | 107028918 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGA CCTATGCAGC CGGGGAACCG CCGCGCGTCG TCAGCGCGGC CGCGAGGCTC
TACGCGAAAT GCCTGCTGGT CGGATTCGCG TTGCTGCCCG CCTATCTGAT TGCCTATCTG
TGGTTCTTCA GCGACCGGGG CGTCGTGTTC GAGAACCACG CTTTCCATGA AATCGCGATC
GCGGCGGCGA CACTCGAAGG CGCGTTCGTC ACCTACGTGA CGTGGGTGTG CTACCGGTCG
TCAGGCGAGC CGCTGCTGCG CTGGCTGACG CTCGGTTTTC TCGGCTTCGC GATGATCTAT
GCGCTGCACG GGGCGTTCAC CGGGATGGCG CACCACAATA TCTGGCTGTT CCTGCTGTAC
GGGCCCGCGT CGCGGTTCGT GATGTCGGCG CTGCTGCTCA CGGGCCTGCT GTCGTATTCG
CGTCCGCCGG ACCGGCTCGA CAAGCGCACG AGCATGCGGA CGTGGTTGCC GTGGATCGTG
TTCTTCCTGA TCGTCAACGT GGCGGTTGCG TACATCGCCT ATTCGCCGGT CGCGGGCGCG
CTGGGCACGC GGCTGTCGAT GGAAGGCGGC GCGCTGGTGT TCTCGCTGCT GAACGTGTGC
CTGCTGCTCG CGCGGCGCAT CCGCTCGCCG CTGATGGTGA TCTACGGCGT GTCGATCATG
GCGTTCGCGC TATCGTCGCT CGCGTTCATC CTCGGCAAGC CGTGGAATCA CATGTGGTGG
CTCGCGCATG CGATCTTCGC GGGCGGATTC TTCCTGCTCA GTTACGGCGT CGTGCAGGCG
CTGCAGACGA CACGCTCGTT CTCGGCGATC TACAGCCAGG AAGACCTGAT GAGCCGGCTG
TCGGAATCGA TGGCGCGTAC CGAGAGCGCG CTGCAGGAAC TGCGGCGCAC GAACCAGAAG
CTCGAATACA TGGCCGCGAC CGACCCGATG ACGGGCGCGT CGAACCGCCG GCAGTTCATC
GCGCAGGTCG AGCGTGAGAT CGTGCGGGCC GAGCGAGACG GCACGCCGTT CTGCCTGCTC
GCGCTCGATC TCGACAATTT CAAGAACATC AACGATGCAT ACGGGCACCA GATCGGCGAC
GAGGTGCTGC GCGGCGTCGT GCGCCAGTGC CTCGAGGCAA TTCGGCCGGC GGGCGCGCTC
GCGCGGGTCG GCGGCGAGGA GTTCATGGCG CTCTTGCCGG AGATGCCGCT CGAAGGCGCG
CGGATGACCG CCGAGCGCGT GCGTTCGTCG ATTTCGAGTT CGCCGTTCGG GCTCGACTTC
AAGCGCGTGC AGGTGACGGT CAGCGTCGGC GTCGCGCAAT ACGGCGTCGA CGGCAGCACG
GTCGATGCGC TGCTGCGGGT GGTCGACGAG CGGCTGTATC AGGCGAAGCG GGAAGGGCGC
AACCGCGTGG TGTCGCGCTA A
|
|---|
| Protein sequence | MSTTYAAGEP PRVVSAAARL YAKCLLVGFA LLPAYLIAYL WFFSDRGVVF ENHAFHEIAI
AAATLEGAFV TYVTWVCYRS SGEPLLRWLT LGFLGFAMIY ALHGAFTGMA HHNIWLFLLY
GPASRFVMSA LLLTGLLSYS RPPDRLDKRT SMRTWLPWIV FFLIVNVAVA YIAYSPVAGA
LGTRLSMEGG ALVFSLLNVC LLLARRIRSP LMVIYGVSIM AFALSSLAFI LGKPWNHMWW
LAHAIFAGGF FLLSYGVVQA LQTTRSFSAI YSQEDLMSRL SESMARTESA LQELRRTNQK
LEYMAATDPM TGASNRRQFI AQVEREIVRA ERDGTPFCLL ALDLDNFKNI NDAYGHQIGD
EVLRGVVRQC LEAIRPAGAL ARVGGEEFMA LLPEMPLEGA RMTAERVRSS ISSSPFGLDF
KRVQVTVSVG VAQYGVDGST VDALLRVVDE RLYQAKREGR NRVVSR
|
|---|
| |