Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6137 |
Symbol | ispF |
ID | 4096871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 733328 |
End bp | 733813 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638019424 |
Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_625974 |
Protein GI | 107028879 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.316439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCA GAATCGGACA AGGCTATGAC GTGCACCAGC TCGTCGAAGG GCGCCCCCTC ATCATCGGCG GCGTGACGAT TCCGTACGAG CGCGGCCTGC TCGGCCACTC GGACGCGGAC GTGCTGCTGC ATGCGATCAC CGACGCGCTG TTCGGCGCGG CGGCGCTCGG CGACATCGGC CGCCATTTCT CCGACACGGA CGCGGCGTTC AAGGGCGCGG ACAGCCGCGT GCTGCTGCGC GCGTGCGCCG AGCGCGTGAA GGCGGCCGGC TTCACGATCC AGAACGTCGA CAGCACCGTG ATCGCGCAGG CGCCGAAGCT CGCGCCGCAT ATCGACGGGA TGCGTGCGAA CATCGCGGCG GATCTCGGGC TGCCGCTCGA GCGCGTGAAC GTGAAGGCGA AGACCAACGA GAAGCTCGGC TATCTCGGTC GCGGCGAGGG GATCGAGGCG CAGGCCGCCG CGCTGCTGGT CAAGCAGGGC GGCTGA
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Protein sequence | MDFRIGQGYD VHQLVEGRPL IIGGVTIPYE RGLLGHSDAD VLLHAITDAL FGAAALGDIG RHFSDTDAAF KGADSRVLLR ACAERVKAAG FTIQNVDSTV IAQAPKLAPH IDGMRANIAA DLGLPLERVN VKAKTNEKLG YLGRGEGIEA QAAALLVKQG G
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