Gene Bcen_6116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6116 
Symbol 
ID4097149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp711052 
End bp712065 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID638019404 
Productallantoicase 
Protein accessionYP_625954 
Protein GI107028859 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4266] Allantoicase 
TIGRFAM ID[TIGR02961] allantoicase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTC CGCTTCTCGA TCCGAACGCA CCCGATTTCA CGCGGCGCTA CGTGAATCTT 
GCCGACCCGC GTCTCGGTGC GCAGGCGCTC GAGGCCAGCG ACGATTTCTT CGCGCCGAAG
GACCGGATGC TGAACCCCGA GCCGGCCGTC TTCATCCCCG GCAAGTACGA CGACCACGGC
AAGTGGATGG ACGGCTGGGA AACGCGCCGC AAGCGCACGA CCGGCTACGA CTGGTGCATC
GTCAAGCTCG CGCGCCCGGG CGTGATCAAG GGCTTCGACA TCGACACGAG CCACTTCACC
GGCAACTTCC CGCCGGCGGC CTCGATCGAG GCCGCGTTCG TGGCTGACGG CGCGCCGACG
CAGGCGACCG AGTGGGTCGA GATCGTGCCG TCGACGACGC TGCAGGGCAA CAGCCATCAC
TACGTCGAAG CGAACGATGC ACGCTCGTTC ACGCATCTGC GCGTGAACAT CTACCCGGAC
GGCGGCATCG CGCGCCTGCG TGTGTACGGC CAGCCGCAGC TCGACTGGGC CGGCGCGAGC
GCGACCGAGC AGTTCGACCT CGCGGCGATG GAAAACGGCG GTTACGTGGT GGCCGCGAAC
AACCAGCACT TCGGCGTCGC GTCGAACCTG CTGCTGCCGG GCCGCGGCGT GAACATGGGC
GACGGCTGGG AAACGCGCCG CCGCCGCGAA CCGGGCAACG ACTGGGCGAT CATCGCGCTC
GCGCAACCGG GCGTGATCCG CAAGATCGAA GTCGATACCG CGTTCTTCAA GGGCAATTAC
CCGGATCGGT GCTCGATCCA GGCCGCCTAT GTGTCGGGCG GCACCGACAG CTCGTTGATC
ACGCAGTCGA TGTTCTGGCC GGTGCTGCTC GGCGAACAGA AGCTGCAGAT GGACAAGCAG
CACTACTTCG AACACGACAT CGCGTCGCTC GGCCCCGTCA CGCACGTGCG ACTGAACATC
ATTCCGGACG GCGGCGTGTC GCGCCTGCGC TTGTGGGGGA CGCTCGACAA ATGA
 
Protein sequence
MAVPLLDPNA PDFTRRYVNL ADPRLGAQAL EASDDFFAPK DRMLNPEPAV FIPGKYDDHG 
KWMDGWETRR KRTTGYDWCI VKLARPGVIK GFDIDTSHFT GNFPPAASIE AAFVADGAPT
QATEWVEIVP STTLQGNSHH YVEANDARSF THLRVNIYPD GGIARLRVYG QPQLDWAGAS
ATEQFDLAAM ENGGYVVAAN NQHFGVASNL LLPGRGVNMG DGWETRRRRE PGNDWAIIAL
AQPGVIRKIE VDTAFFKGNY PDRCSIQAAY VSGGTDSSLI TQSMFWPVLL GEQKLQMDKQ
HYFEHDIASL GPVTHVRLNI IPDGGVSRLR LWGTLDK