Gene Bcen_6088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6088 
SymbolguaA 
ID4097302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp685109 
End bp686728 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content66% 
IMG OID638019376 
ProductGMP synthase 
Protein accessionYP_625926 
Protein GI107028831 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGACA AAATCCTGAT TCTCGACTTC GGTTCGCAAG TCACCCAACT GATTGCACGG 
CGCGTGCGTG AAGCGCACGT CTACTGCGAA ATCCATCCGA ACGACGTGTC CGACGACTTC
GTCCGCGAGT TCGCGCCGAA GGCGGTGATC CTGTCGGGCA GCCACGCGAG CACGTACGAA
GACCATCAAC TGCGCGCGCC GCAGGCCGTG TGGGATCTCG GCGTGCCGGT GCTCGGCATC
TGCTACGGCA TGCAGACGAT GGCCGTGCAG CTCGGCGGCA AGGTCGAGTG GAGCGACCAT
CGCGAATTCG GCTACGCGGA AATGCGTGCG CACGGCCATA CGCGCCTGCT CGACGGCATC
GAGGATTTCA CGACGGCCGA AGGCCACGGG ATGCTGAAGG TCTGGATGAG CCACGGCGAC
AAGGTGGCCG AGCTGCCGCC GGGCTTCGCG CTGATGGCGT CGACGCCGAG CTGCCCGATC
GCCGGCATGG CCGACGAGGC GCGCGGCTAC TACGCGGTGC AGTTCCACCC GGAAGTCACG
CACACGGTGA AGGGCCGCCA GATCATCGAG CGCTTCGTGC TGCAGATCGC CGGCGCGAAG
CCCGACTGGA TCATGAAGAA CCACATCGAG GAAGCCGTCG CGAAGATCCG CGAGCAGGTC
GGTGACGAGG AAGTGATTCT CGGCCTGTCG GGCGGCGTCG ATTCGAGCGT CGCGGCCGCG
CTGATCCATC GCGCGATCGG CGATCAACTG ACCTGCGTGT TCGTCGACCA CGGCCTGCTG
CGCCTGAACG AAGGCAAGAT GGTGCTCGAC ATGTTCGAGG GCCGCCTGCA TGCGAAGGTC
GTGCACGTCG ACGCATCCGA CCAGTTCCTC GGCCATCTGG CCGGCGTGAC CGATCCGGAA
GCGAAGCGCA AGATCATCGG CCGCGAGTTC GTCGAGGTGT TCCAGGCCGA GGCGAAGAAG
CTGTCGAAGG CGAAGTGGCT CGCGCAGGGC ACGATCTACC CGGACGTGGT CGAATCGGGC
GGCACGAAGA CGAAGAAGGC GACGACGATC AAGAGCCACC ACAACGTCGG CGGCCTGCCG
GAAACGCTCG GCCTGAAGCT GCTCGAGCCG CTGCGCGACC TGTTCAAGGA CGAAGTGCGC
GAGCTGGGTG TCGCGCTCGG CCTGCCGCCG GAGATGGTGT ACCGCCATCC GTTCCCGGGC
CCGGGCCTCG GCGTGCGAAT TCTCGGCGAA GTGAAGCGCG AATACGCGGA GCTGCTGCGC
CGCGCGGACG CGATCTTCAT CGAGGAACTG CGCAACACGA CCGCGACCGC GCAGGACGCG
GCTGCCGGCC TGTGCGGCGA GGCCGACGTC GGCAAGAGCT GGTACGACCT GACGAGCCAG
GCGTTCGCGG TGTTCCTGCC GGTCAAGTCG GTCGGCGTGA TGGGCGATGG GCGGACATAC
GACTACGTGA CGTCGCTGCG CGCGGTGCAG ACGACCGACT TCATGACTGC GCATTGGGCG
CATCTGCCGT ATGCGCTGCT CGGTCGCGCG TCGAATCGCA TCATCAACGA AGTGCGCGGG
ATCAATCGGG TCGTGTACGA CATCTCGGGG AAGCCGCCGG CGACGATCGA GTGGGAGTGA
 
Protein sequence
MHDKILILDF GSQVTQLIAR RVREAHVYCE IHPNDVSDDF VREFAPKAVI LSGSHASTYE 
DHQLRAPQAV WDLGVPVLGI CYGMQTMAVQ LGGKVEWSDH REFGYAEMRA HGHTRLLDGI
EDFTTAEGHG MLKVWMSHGD KVAELPPGFA LMASTPSCPI AGMADEARGY YAVQFHPEVT
HTVKGRQIIE RFVLQIAGAK PDWIMKNHIE EAVAKIREQV GDEEVILGLS GGVDSSVAAA
LIHRAIGDQL TCVFVDHGLL RLNEGKMVLD MFEGRLHAKV VHVDASDQFL GHLAGVTDPE
AKRKIIGREF VEVFQAEAKK LSKAKWLAQG TIYPDVVESG GTKTKKATTI KSHHNVGGLP
ETLGLKLLEP LRDLFKDEVR ELGVALGLPP EMVYRHPFPG PGLGVRILGE VKREYAELLR
RADAIFIEEL RNTTATAQDA AAGLCGEADV GKSWYDLTSQ AFAVFLPVKS VGVMGDGRTY
DYVTSLRAVQ TTDFMTAHWA HLPYALLGRA SNRIINEVRG INRVVYDISG KPPATIEWE