Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6065 |
Symbol | |
ID | 4097233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 661517 |
End bp | 662890 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638019353 |
Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
Protein accession | YP_625903 |
Protein GI | 107028808 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTGC TGGTCGAACT GGTCGCGTTT GCGGTGGCGA TCGGGGTACT GGTCGTCGTG CATGAGTACG GACATTATCG CGTCGCGCGC TGGTGCGGCG TGAAGGTGCT GCGTTTCTCG ATCGGCTTCG GCCAGCCCAT CGCGCGCTGG GTCAGCCGCA GGACGGGCAC CGAGTGGACG CTGTCCGTGC TGCCGCTCGG CGGCTACGTG AAGATGCTCG ACGAGCGCGA TCCGGGCCCG GGCGGCATCC CGGCCGAAGA GCTCGGCCAG GCATTCAACC GCCAGTCGGT CTACAAGCGC ATCGCGATCG TCGCGGCCGG GCCGATTGCA AACTTCCTGC TGGCAATCGC ACTGTTTTCC CTCGTATTCG CCACCGGCGT GACCGAGCCG ACCGCGATCG TCGCGCCGCC GGCCGCCGGC ACCGCAGCGG CTCGCGCGGG CTTCGACGGC AGCGAGACGG TCGTGTCGAT CCGCAACGCG CAGGGCGGCG AGTCCGAGCC GGTGCGATCG TGGTCGGACC TGCGCTGGAA GCTGCTGTCG GCCGCGTTCG ACCATCGCGA GGTCGTGCTC GGCGCGCGCG ACGGCAATGC GACGTTCGAC TTCCGCGTCG ACCTCCGCAA CGTGCCCGAC AGCCAGCTCG ACGACGACTT CATGGCCCAT CTGGGCTTCG AGGCCGGCGG CGGCACGTTG TCGGTCGCGT CGGTGCAGCC GGGCAGCGCG GCGGAGCAGG CCGGCCTGAA GGTCGGCGAC AAGCTGGTCG CGCTCGACGG CAAGCCGATC GGCGGCGCGG CGCGTTTCAT CGATACGGTG AAGCACCATG CGGGCCAGCC GCTCGAGCTG CGGATCGAGC GCAATGGCGC CGCACAGACG GTGTCGATCG TGCCGCAGAT GCAGCGTGAC GACGAATCGG GGCAGCAGAT CGGCCGCATC GGCGCGGCGC TGTCGATGCA CGCGCCGTCG GTGGACGTGC GCTACGGGCC GATCGAGAGC CTGCGGCTCG GCGCGCACCG CACGTGGGAC ATTTCCGTGT ATTCGCTGAA GATGTTCGGG CGGATGATCA CGGGCAACGC GTCGCTGAAG AACCTGTCCG GCCCGGTGAC GATCGCCGAC TACGCAGGCA AGAGCGCGCG GCTCGGTCCG TCGGCGTTCC TGTCGTTCCT CGCCCTTGTC AGCATTAGCC TTGGCGTCCT GAACTTGTTG CCGATTCCCG TTTTGGACGG GGGGCATCTG TTATATTATG CGGTTGAAGC CGCGACCGGG AAAGCCGTCT CGGAGCGCTG GCAGCTGATT CTGCAAAGAG CCGGGTTGAT CTGCATCGTC GCGTTGTCGG CGATCGCGCT GTTCAACGAT CTGGCTCGGT TAATCCATTT CTGA
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Protein sequence | MNVLVELVAF AVAIGVLVVV HEYGHYRVAR WCGVKVLRFS IGFGQPIARW VSRRTGTEWT LSVLPLGGYV KMLDERDPGP GGIPAEELGQ AFNRQSVYKR IAIVAAGPIA NFLLAIALFS LVFATGVTEP TAIVAPPAAG TAAARAGFDG SETVVSIRNA QGGESEPVRS WSDLRWKLLS AAFDHREVVL GARDGNATFD FRVDLRNVPD SQLDDDFMAH LGFEAGGGTL SVASVQPGSA AEQAGLKVGD KLVALDGKPI GGAARFIDTV KHHAGQPLEL RIERNGAAQT VSIVPQMQRD DESGQQIGRI GAALSMHAPS VDVRYGPIES LRLGAHRTWD ISVYSLKMFG RMITGNASLK NLSGPVTIAD YAGKSARLGP SAFLSFLALV SISLGVLNLL PIPVLDGGHL LYYAVEAATG KAVSERWQLI LQRAGLICIV ALSAIALFND LARLIHF
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