Gene Bcen_6062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6062 
Symbol 
ID4097230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp658696 
End bp659478 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID638019350 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_625900 
Protein GI107028805 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.385081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTATA CCAGCTCTAC CGTTCGCGTG CCTGACGTCG GTGTCGTGCC GCGTCACATC 
GCGATCATCA TGGACGGCAA TGGCCGTTGG GCGACCGAAC GCCGCTTGCC GCGCGTCGCG
GGGCACACCC GCGGCGTCGA TGCCGTGCGG GCGGTGGTCG AAGGCTGCGC GCGCGCCGGC
GTCGAATACC TGACGCTGTT CGCGTTCAGT TCGGAAAACT GGCGCCGGCC GAACGACGAA
GTGTCGTTCC TGATGCGGCT GTTCATCACC GCGCTCGAGC GCGAAGTGGG CAAGCTGCAT
GCGAACGGGA TCCGCCTGCG TGTCGTCGGC GATCTCGACC GTTTCGAGCC GCGCATCCGC
GAGCTGATTC GCCGCGCCGA AACCAAGACG GCGCGCAATA CCCGTCTGAC GCTCACCATC
GCGGCCAACT ACGGCGGGCG ATGGGACATC CTGCAGGCGA CGAAGAAGCT CGTCGAGCAG
GCCGTGCGCG AAGGCCGCGA GGTCGAGGTG ACCGAGGACG CATTCGCGCC GCACCTGGCG
ATGGCCTACG CGCCGGAGCC CGATCTCTTC ATCCGCACCG GCGGCGAGCA ACGCGTCAGC
AACTTCCTGC TGTGGCAGCT CGCGTACGCC GAATTCTATT TCACCGACAA GTACTGGCCG
GATTTCGACG GCGCGGCACT GGCCGACGCG ATGGCGTCGT ATACCGAGCG CGAGCGCCGT
TTCGGGCGCA CGAGTGCGCA GCTCGAACCG CAATCGCAGA ACGCCGACTC CCTTTCATGC
TGA
 
Protein sequence
MTYTSSTVRV PDVGVVPRHI AIIMDGNGRW ATERRLPRVA GHTRGVDAVR AVVEGCARAG 
VEYLTLFAFS SENWRRPNDE VSFLMRLFIT ALEREVGKLH ANGIRLRVVG DLDRFEPRIR
ELIRRAETKT ARNTRLTLTI AANYGGRWDI LQATKKLVEQ AVREGREVEV TEDAFAPHLA
MAYAPEPDLF IRTGGEQRVS NFLLWQLAYA EFYFTDKYWP DFDGAALADA MASYTERERR
FGRTSAQLEP QSQNADSLSC