| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6053 |
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| Symbol | |
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| ID | 4097104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | + |
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| Start bp | 646646 |
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| End bp | 648886 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638019341 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_625891 |
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| Protein GI | 107028796 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.255704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATGGC GCGGGCGACG GTCGTTGGCG CCGTCGTCCG TCGCTGCGGC GCGCACTGTT
TCGTGTGCGC TGCAGCACGT CATCCGGCCC GCATTGCGTA CCCCGCCGCG GCGTCAAACT
GAGATAATCG GGCATCCGAT TTTTCAGAAC GACTCTGCCG CCAGCATGGC CCGAACCCAA
GCCGAACCGC CAGCCAGCCA GCCCGACGCG CGCGCCGCGT GGCTGCGCGA CCAACTCGAG
CGGGCGAACT ACGCCTACTA CGTGCTCGAC CAGCCGGATC TGCCCGACGC CGAATACGAC
CGGCTGTTCC GCGAGTTGCA GCAGCTCGAA ACCGACCATC CCGAACTCGT GACACCCGAT
TCGCCGACGC AGCGTGTCGG CGGCGAAGCG GCCGGCGGCT TCACGCCGGT CGTCCACGAT
GCGCCGATGC TGTCGCTGAA CAACGGCTTT GCCGACGAGG ACATCGTCGC GTTCGACAAG
CGCGTCGCCG ACGCGCTCGC CAAGACGACC GATCTGGCCG GCTCGGTGAC CGACCCCGTC
GAATACGCGT GCGAACTGAA GTTCGACGGC CTGGCGATCT CGCTGCGCTA CGAGCAAGGC
GTGTTCGTGC AGGCCGCGAC GCGTGGCGAC GGGACGACGG GCGAGGACGT GACCGAGAAC
GTGCGCACGA TCCGCTCGAT TCCGCTGAAG CTGAAGGGCA AGCACGTGCC GGCGGTGCTC
GACGTACGCG GCGAGGTGCT GATGTTCAAG CGCGATTTCG CACGCCTGAA CGAACGCCAG
CGCGCGGCCG AGCAGCGCGA ATTCGCGAAC CCGCGCAACG CAGCGGCCGG CAGCCTGCGC
CAGCTCGACT CGAAGATCAC CGCGCAGCGG CCGCTGTCGT TCTTCGCGTA CGGGATCGGC
GTGCTCGACG GGATGCCGAT GCCCGACACG CACAGCGCGC TGCTCGACTG GTACGAGTCG
CTCGGCCTGC CGGTGAATCG GGAGCGCGCG GTCGTGCACG GCGCCGAAGG CTTGCTCGAC
TTCTTCCGCA AGGTCGGCGA GAAGCGCGAG TCGCTGCCGT ACGACATCGA CGGCGTCGTC
TACAAGGTCA ACCGGCGCGA CGAGCAGGAG CGGCTCGGCT TCGTGTCGCG TGCGCCGCGC
TTCGCGCTCG CGCACAAGTT CCCCGCGCAG GAAGCGCTGA CGAAGCTCGT CGCGATCGAC
GTGCAGGTCG GCCGCACCGG TGCGATCACG CCGGTCGCGC GTCTCGAGCC GGTGTTCGTC
GGCGGCGCGA CCGTGACCAA TGCGACGCTG CACAACGAGG ACGAAGTGCG CCGCAAGGAC
ATCCGGATCG GCGACACCGT GATCGTGCGG CGTGCGGGCG ACGTGATTCC GGAAGTCGTC
GGCGCGCTGC TCGACCGGCG CCCGGCGGAT GCGGCCGAAT TCGTGATGCC GACCGAATGC
CCGGTGTGCG GCTCGAAGAT CGAGCGCCTG CCGGACGAGG CGATCGCGCG CTGCACGGGC
GGGCTGTTCT GCCCGGCGCA GCGCAAGCAG GCGCTGTGGC ATTTCGCGCA ACGCCGCGCG
CTCGACATCG ACGGCCTCGG CGAGAAGATC ATCGACCAGC TCGTCGAGCT GAATCTCGTG
CGCACGCCGG CCGACCTGTT CAATCTGGGC TTCGCGACGC TGGCCGAACT CGACCGGTTC
GCCGAGAAGT CCGCGCAGAA CCTGATCGAT TCGCTCGAGA AGGCCAAGCA TACGACGCTC
GCGCGCTTCA TCTACGGGCT CGGCATCCGC CATGTCGGCG AATCGACCGC GAAGGATCTC
GCGAAGCATT TCGGCTCGCT GACGCCGATC ATGGACGCGT CGATCGAGGA ACTGCTCGAA
GTCAACGACG TCGGGCCGAT CGTGGCCGAG TCGCTCCACC AGTTCTTCGC GGAGGAGCAC
AACCGGACCG TGATCGAGCA GTTGCGCGCG CCGGGCAAGG TCACGTGGCC CGAAGGGCCG
CCCGCGCCGA AGGCGCCGCA GGGCGTGCTG GCCGGCAAGA CGGTCGTGCT GACGGGCACG
CTGCCGAATC TCACGCGCGA TGCGGCGAAG GAGATGCTCG AAGCGGCGGG CGCGAAAGTG
GCCGGTTCGG TGTCGAAGAA GACGGATTAC GTGGTCGCGG GCGCCGAAGC CGGCAGCAAG
CTCGCGAAGG CCGAGGAACT CGGCATCCCC GTGCTGGACG AAGATGGTCT GCACCAACTC
CTGGAGGGCA ATACGCCATG A
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| Protein sequence | MRWRGRRSLA PSSVAAARTV SCALQHVIRP ALRTPPRRQT EIIGHPIFQN DSAASMARTQ
AEPPASQPDA RAAWLRDQLE RANYAYYVLD QPDLPDAEYD RLFRELQQLE TDHPELVTPD
SPTQRVGGEA AGGFTPVVHD APMLSLNNGF ADEDIVAFDK RVADALAKTT DLAGSVTDPV
EYACELKFDG LAISLRYEQG VFVQAATRGD GTTGEDVTEN VRTIRSIPLK LKGKHVPAVL
DVRGEVLMFK RDFARLNERQ RAAEQREFAN PRNAAAGSLR QLDSKITAQR PLSFFAYGIG
VLDGMPMPDT HSALLDWYES LGLPVNRERA VVHGAEGLLD FFRKVGEKRE SLPYDIDGVV
YKVNRRDEQE RLGFVSRAPR FALAHKFPAQ EALTKLVAID VQVGRTGAIT PVARLEPVFV
GGATVTNATL HNEDEVRRKD IRIGDTVIVR RAGDVIPEVV GALLDRRPAD AAEFVMPTEC
PVCGSKIERL PDEAIARCTG GLFCPAQRKQ ALWHFAQRRA LDIDGLGEKI IDQLVELNLV
RTPADLFNLG FATLAELDRF AEKSAQNLID SLEKAKHTTL ARFIYGLGIR HVGESTAKDL
AKHFGSLTPI MDASIEELLE VNDVGPIVAE SLHQFFAEEH NRTVIEQLRA PGKVTWPEGP
PAPKAPQGVL AGKTVVLTGT LPNLTRDAAK EMLEAAGAKV AGSVSKKTDY VVAGAEAGSK
LAKAEELGIP VLDEDGLHQL LEGNTP
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