Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6045 |
Symbol | |
ID | 4097096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 635654 |
End bp | 636793 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638019333 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_625883 |
Protein GI | 107028788 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.790399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGCCA CCCTAGCCCT TACCGAACAG CTGATCGCCC GCGCGTCCGT GACGCCCGAC GACCAGCACT GCCAGCAGAT CATGACCGAG CGCCTCGCCG CGCTCGGCTT CGAATGCGAG ACCATCGCGT CGCACGGCGT GACCAACCTG TGGGCCGTCA AGCGCGGCAC CGACGGCCGC GACGGCAAGC TGCTCGCGTT CGCGGGCCAT ACCGACGTCG TGCCGACCGG CCCGCTCGAA CAGTGGACCT CGCCGCCGTT CGTCCCCGCC CATCGCGACG GCAAGCTGTA CGGCCGCGGC GCGGCCGACA TGAAGACGTC GCTCGCGGCG TTCGTCGTCG CCTCCGAGGA ATTCGTCGCG GCGCATCCGG ACCACCGCGG CGCGATCGCG TTCCTGATCA CGAGCGACGA GGAAGGCCCG GCCACCGACG GCACCGTGAA GGTCGTCGAG CTGCTGCAGG AACGCGGCGA GCGGCTCGAC TACTGCATCG TCGGCGAGCC GACGTCGACC GCCGAGCTCG GCGACGTCGT CAAGAACGGC CGCCGCGGGT CGATGTCCGG CGAACTGGTC ATCAAGGGCG TGCAAGGCCA CATTGCCTAT CCGCACCTCG CGAAGAACCC GATCCACCTG CTCGCGCCGG CGCTCGCCGA GCTCGCCGCC GAGCAATGGG ACGCCGGCAA CGAATACTTC CCGCCGACCA CCTGGCAGGT GTCGAACCTG CACGCTGGCA CCGGCGCGAC CAACGTGATC CCGGGCCACG CCGACCTGCT GTTCAACTTC CGCTTCTCGA CCGCGAGCAC CGTCGAAGGC CTGCAGGCCC GCGTGCACGC GATCCTCGAC AAGCACGGCC TCGAATACAC GCTGAAGTGG TCGGTGAGCG GCCTGCCGTT CCTCACGCCG CGCGGTGAAC TGTCGGGCGC GCTGGAACAC GCGATCCGCA CCGAGACCGG TATCACGACC GAGCTGTCGA CGACGGGCGG CACGTCGGAC GGCCGCTTCA TTGCGCGCAT CTGCCCGCAG GTGATCGAGT TCGGCCCGCC GAACGGCAGC ATCCACAAGA TCGACGAGCA CATCGAAGTG CGCTTCGTCG ACCCGCTGAA GAACGTGTAC CGACGCGCGC TCGAACAACT GATCGCCTGA
|
Protein sequence | MSATLALTEQ LIARASVTPD DQHCQQIMTE RLAALGFECE TIASHGVTNL WAVKRGTDGR DGKLLAFAGH TDVVPTGPLE QWTSPPFVPA HRDGKLYGRG AADMKTSLAA FVVASEEFVA AHPDHRGAIA FLITSDEEGP ATDGTVKVVE LLQERGERLD YCIVGEPTST AELGDVVKNG RRGSMSGELV IKGVQGHIAY PHLAKNPIHL LAPALAELAA EQWDAGNEYF PPTTWQVSNL HAGTGATNVI PGHADLLFNF RFSTASTVEG LQARVHAILD KHGLEYTLKW SVSGLPFLTP RGELSGALEH AIRTETGITT ELSTTGGTSD GRFIARICPQ VIEFGPPNGS IHKIDEHIEV RFVDPLKNVY RRALEQLIA
|
| |