| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6023 |
|---|
| Symbol | |
|---|
| ID | 4097074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 611788 |
|---|
| End bp | 612669 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638019311 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_625861 |
|---|
| Protein GI | 107028766 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0029418 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGC CCGCTCCAGC CGACGTATCG AAACCGTACG ACGTCATCGA CATCCCGCCG
GAATTCGCGC CGACCGCCGT CCATCCGATG CGTGTGCGCG CGCGGCAGGT CGATGCCGGC
CGCCGCATTC CGCTGCACAC GCATGCGTGG GCTCAACTCG CGTACGCGTC GCGCGGCGTG
CTGCGCGTCG CGACGACCGG CACGACCTGG ATGGTGCCGC CGTCCCGCGC GATCTGGGTA
CCGCCGCACG TGACGCACGA GGTCACGATC GTCGAAGAGG CCTATTTGCG CACGCTGTAT
ATCGACGAGT CGATCGTGCC GGGCGGGCTC GACGCATGCC GCGTCGTCGA GGTGACGGGG
TTGCTGCGCG AACTGATCGT CGCACTCGAC GCGCGCGATC TGAGCACCGC GCGGGAGCGC
CTGCTGTGCG GGCTCGTGCT CGACGAACTG AGTCAGGCCG AGCCTCTACC GCTCGCGGTG
CCGATGCCCG ACGAGAAACG GCTGCGCCTG CTGTGCGAAT CGGTACTCGC GCACCCCGCG
CATGCGGAGT CGCTCGAACA CTGGGCGAGC GAGGTCGGCG CGAGCACGCG CACGATATCG
CGGCTTTTCA AGCAGGAACT GGGCGTGAGC TTTTCGCAGT GGCGCCAGCA GGCGCTGCTC
GCCCGGGCGA TCCCGCTGCT GAACCAGGGG CGCCCGCTGT CGCATATCGC GCGCGAACTC
GGCTACCAGA GCCAGAGCGC GTTCTCGGCC ATGTTCCGCC GCGCCTTCGG CGAAAGCCCG
CGCGCGTTCA TGCTCCGTGG CTACGAACAT CGCGGCCCGG AAGGCGGTGT CGCGGACAGC
GAAACGCCGG ACGACGACGG CCCGATCGAC GCGGTGCGCT GA
|
|---|
| Protein sequence | MNPPAPADVS KPYDVIDIPP EFAPTAVHPM RVRARQVDAG RRIPLHTHAW AQLAYASRGV
LRVATTGTTW MVPPSRAIWV PPHVTHEVTI VEEAYLRTLY IDESIVPGGL DACRVVEVTG
LLRELIVALD ARDLSTARER LLCGLVLDEL SQAEPLPLAV PMPDEKRLRL LCESVLAHPA
HAESLEHWAS EVGASTRTIS RLFKQELGVS FSQWRQQALL ARAIPLLNQG RPLSHIAREL
GYQSQSAFSA MFRRAFGESP RAFMLRGYEH RGPEGGVADS ETPDDDGPID AVR
|
|---|
| |