Gene Bcen_6018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6018 
Symbol 
ID4097024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp604600 
End bp606222 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content68% 
IMG OID638019299 
ProductABC transporter related 
Protein accessionYP_625856 
Protein GI107028761 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.685553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGC CGACCGTATC GACGCAGCAC GAACCGCTGC TGTCGCTCGA GCGTCTGCAT 
GTGCGCTTCG GCGACACGGT CGCGGTGGAC GACGTGACGC TCGCGATCGG GCGGGGCGAG
CGGGTCGCGC TCGTCGGCGA ATCGGGGTCC GGCAAGAGCG TGACCGCGCT GTCGATCCTG
CGGTTGCTGC GCGACGCAGA GGTCACGGGC GCGATCCGCT TTGCCGGGCA GGATCTGGCG
ACCAGGAGCG AGCGCGAGAT GCGCGGGCTG CGCGGCTCGG ACATCGCGAT GATCTTCCAG
GAGCCGATGA CGGCGCTCAA CCCGCTGTAT ACGATCGGCG TGCAGATCGG CGAGACGATC
GTGCTGCACG ACGGCGTATC GGCCGTCGAG GCGCGCAAGC GGGCGATCGC GTTGCTCGCG
CGCACCGGCA TCGCGGAGCC CGAGAAGCGG GTCGACAGCT ACCCGCACCA GTTGTCGGGC
GGCCAGCGGC AGCGCGCGAT GATCGCGATG GCGCTCGCGT GCCGGCCGCG CCTGCTGCTG
GCCGACGAGC CGACCACCGC GCTCGACGTG ACGATCCGTG CGCAGATCGT CGACCTGCTG
CTGGAACTGC AGCGGGAGGA GGCGGAAAAG CGCGGGATGG CGATCCTCCT GATCACGCAC
GATCTGAATC TCGTGCGGCA CTTCGCGCAG CGGGTGGCGG TGATGGAACA CGGCCGGCTC
GTCGAGAGCG GGCCGGTCGA GCAGATTTTC GCGGCACCCG AGCATCCGTA TACGCAGCGG
CTGCTGAACA GCCGGCCGCA ACGCACGGTC ACGCCGGTGA TGCCGATCGC GCCCGTCGTG
CTCGACGCGC GCCACGTGAG CGTGCAGTTC GCGCGCAAGC GGCCGGGCTT CGCGGGCTGG
TTCGGCACGG TGCCGGTGAC GGCCGTCGCC GACGTGTCGG TGTCGGTGCG GCAGGGCGAA
ACGCTCGGCA TCGTCGGCGA ATCGGGCTCA GGCAAGTCGA CGCTCGCGAT GGCGCTGCTC
GGGCTGCAGA AGACGGCCGG CGGCGAGATC GAATTCCAGG GGCGCGCGCT GTCGACCTAT
CGCGGCCGCG AGCAGACCGC GCTGCGCTCG AACATGCAGG TGGTCTTTCA GGATCCATTC
AGTTCACTTT CGCCGCGTCA CACGATCGAG CGGATCGTCG GCGAAGGGCT CGAACTGCAT
CGCCCGGACA TGACGCCCGA CGCGCGCCGC GCGAAGTCGC TCGCGGTGCT GCGCGAAGTC
GGGCTCGACC GGACGGTGCT GCAGCGTTAT CCGCACGAAT TCTCGGGCGG CCAGCGCCAG
CGGATCGCAA TCGCGCGCGC GCTGGTGCTG GAGCCGCGCA TCCTGATCCT CGACGAGCCG
ACGTCGGCGC TCGACGTGTC GATCCAGCAG CAGGTGCTGA AGCTGCTCGC GAATTTGCAA
CAGAAATACA ACCTCGGCTA TGTGTTCATC AGCCACGACC TGGAGGTGAT CGGTGCGATG
GCGCACCGCG TCGCGGTGAT GCAGGACGGC GCCGTCGTCG AGTCGGGGGA CGTGGCCGAC
GTCTTCACCA GACCGTCACA TCCTTACACA CAAAAGCTGT TGAAAGCGGT CTGGAAAGCG
TGA
 
Protein sequence
MSEPTVSTQH EPLLSLERLH VRFGDTVAVD DVTLAIGRGE RVALVGESGS GKSVTALSIL 
RLLRDAEVTG AIRFAGQDLA TRSEREMRGL RGSDIAMIFQ EPMTALNPLY TIGVQIGETI
VLHDGVSAVE ARKRAIALLA RTGIAEPEKR VDSYPHQLSG GQRQRAMIAM ALACRPRLLL
ADEPTTALDV TIRAQIVDLL LELQREEAEK RGMAILLITH DLNLVRHFAQ RVAVMEHGRL
VESGPVEQIF AAPEHPYTQR LLNSRPQRTV TPVMPIAPVV LDARHVSVQF ARKRPGFAGW
FGTVPVTAVA DVSVSVRQGE TLGIVGESGS GKSTLAMALL GLQKTAGGEI EFQGRALSTY
RGREQTALRS NMQVVFQDPF SSLSPRHTIE RIVGEGLELH RPDMTPDARR AKSLAVLREV
GLDRTVLQRY PHEFSGGQRQ RIAIARALVL EPRILILDEP TSALDVSIQQ QVLKLLANLQ
QKYNLGYVFI SHDLEVIGAM AHRVAVMQDG AVVESGDVAD VFTRPSHPYT QKLLKAVWKA