Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6015 |
Symbol | |
ID | 4097021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 600487 |
End bp | 602361 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638019296 |
Product | extracellular solute-binding protein |
Protein accession | YP_625853 |
Protein GI | 107028758 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAGG GTTCGCCCCG GGCCGCCGCC GCGCGTGCCT GCCTTGGCGC GCTGCGGGCC GCCGGCCGCG TGGCCGCGGT GCTGGCGCTG CATGCGGTGC TGGCCGCGCC GGCCGCGCAG GCGGCCTACG CCATCGCGCA GTACGGCGAG CCGAAGTATC CGCCGGGCTT CAAGCATTTC GACTACGTGA ACCCCGACGC GCCGAAGGGC GGCACGCTCG TGCTCGCGAA TCCGAGCCGA CTGACGTCGT TCGACAAGTT CAATCCGTTC ACGATGCGCG GCAACACCGC GCCCGGCATC GACATGCTGT TCGAGAGCCT CGCGACCGGC AGCTCCGACG AACCGGCTTC CGCCTACGGG CTGCTGGCCG ACGACATCGA CGTCGCCCCG GACCGCCGTT CGGTCACGTT CCACCTGAAT CCGCGCGCAC GCTTTTCGAA CGGCGATCGC GTCACGGCCG ACGACGTCAA GTTTTCGTTC GATACGCTCA AGAGCAAGCA GGCCGCACCG CAGTTCGGCG CATATTTCGC GGAAATCGCG AAGGCCGTGG TCGTCGATCC GGCGACCGTG CGCTTCGAGT TCCGTAGCGC GAACCGCGAA CTGCCGCTGA TCGCCGGCGG CGTGCCCGTG TTTTCGCGCA AGTGGGGATT GCGCGCGGAC GGCTCGCGCA TCCCGTTCGA CCAGCTTGCG TTCGAGCAGC CGATCGGCAG CGGCCCGTAC GTGATCGAGC GCTACGACAA CGGCCGCACG ATCACCTACC GGCGCAACCC CGCGTACTGG GGCGCCGACC TGCCGGTACG AGTCGGCACC AACAACTTCG AGCGGATCGT GTACAAGCTG TACGGCGACG GCGTCGCGCG GCTCGAGGCG TTCAAGGCCG GCGAGTACGA CGTGCTCGTC GAGTACATCG CACGCAACTG GACGCGGCGC GACGTCGGCA AGCGTTTCGA CAGCGGCGAG CTCGTCAAGC GCGAATTCCG CCAGCATAAC GGCGCCGGCA TGCAAGGCTT TTTCATGAAC CTGCGCCGGC CGCTGTTCCG CGACGTGCGC GTGCGCCAGG CGCTCGACCT GGCGTTCGAC TTCGAGTGGC TGAACCGGCA ACTGTTCTAC AGCGCATACA CGCGTCTCAA CAGTTATTTC GCCGACACCG ACCTGCAAGC GACTGGTACG CCGAGCGAAG GCGAGCTGAA GCTGCTGGAG CCGCTGCGCG CACAGCTCGA TCCGGCCGTG TTCGGCCCGA CGGTCACGCA GCCGGACACG AATCCGCCGG GCTCGCTGCG CGCGAACCTG CTGAAGGCGC GCGCCCTGCT CGCGCAGGCC GGCTGGACCT ATCGCGACGG CGCGCTGCGC AACGCGAAGG GCGAGCCGTT CGCGTTCGAG ATCCTCGACG ATGCGGGCGG CGCGATGGAG GGCGTCGTGA CCGCCTACCA GCGCAACCTG GCGAAGCTCG GCATCGTCGT GCGGTTTCGC ACGGCCGATT ACGCGCTGCT GCAAAAGCGC CTCGATGCAT TCGACTACGA CATGACGACG ATCCGCCTGC CGGGCGTGCA GGTGCCGGGC GCCGAGCAAT ACTCGCGCTA CGCGAGCAAG TTCGCCGACG AGCCGGGCTC CGACAACTTC ATCGGATTGA AATCGCCGGC CGTCGACGCG TTGCTGCATG CGCTCGGCGC CGCGCAAACG CGCGAGGAAC TGCTCGACGC GACGCACGCG CTCGACCGCG TGCTGATGCA CGGCTACTAC GCGGTCCCGC AGTGGTACAG CACGACGCAC CGCATTGCGT ACAAGCGCAC GCTCGCCTAT CCGCAGACGC TGCCGCTGTA CTATTCGGCC GAGGGCTGGG TCGTGTCGAC CTGGTGGGCG AAGCCCGATC ACTGA
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Protein sequence | MTKGSPRAAA ARACLGALRA AGRVAAVLAL HAVLAAPAAQ AAYAIAQYGE PKYPPGFKHF DYVNPDAPKG GTLVLANPSR LTSFDKFNPF TMRGNTAPGI DMLFESLATG SSDEPASAYG LLADDIDVAP DRRSVTFHLN PRARFSNGDR VTADDVKFSF DTLKSKQAAP QFGAYFAEIA KAVVVDPATV RFEFRSANRE LPLIAGGVPV FSRKWGLRAD GSRIPFDQLA FEQPIGSGPY VIERYDNGRT ITYRRNPAYW GADLPVRVGT NNFERIVYKL YGDGVARLEA FKAGEYDVLV EYIARNWTRR DVGKRFDSGE LVKREFRQHN GAGMQGFFMN LRRPLFRDVR VRQALDLAFD FEWLNRQLFY SAYTRLNSYF ADTDLQATGT PSEGELKLLE PLRAQLDPAV FGPTVTQPDT NPPGSLRANL LKARALLAQA GWTYRDGALR NAKGEPFAFE ILDDAGGAME GVVTAYQRNL AKLGIVVRFR TADYALLQKR LDAFDYDMTT IRLPGVQVPG AEQYSRYASK FADEPGSDNF IGLKSPAVDA LLHALGAAQT REELLDATHA LDRVLMHGYY AVPQWYSTTH RIAYKRTLAY PQTLPLYYSA EGWVVSTWWA KPDH
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