Gene Bcen_6005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6005 
Symbol 
ID4096648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp590711 
End bp592240 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content66% 
IMG OID638019286 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_625843 
Protein GI107028748 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGATT TCCCCTTCCT GAGCCTGGCC ATCTGGGTTC CGATACTGTT CGGCGCGGGG 
CTGCTGCGCG CCGGTTCCGA CCAGCATTCA CGCCGGATAC GACTGATCGC GCTGGTCGGC
GCGATCGCCG GGCTGGCGGC CGTCGTGCCG CTGATCGCCG GTTTCGACGC GCATTCGGCG
GCGATGCAGT TCGTCGAAAG ACGCGACTGG CTGGCGGCAT TCAATGCCGG CTGGCGGGTC
GGCATCGACG GCGCGTCGCT GTGGCTCGTC GTGCTGACCG CATTCACGAC GCTCGTGGTG
GTGGTGGCGT CGTGGGAGTC GGTCACGGTG CGCGTCGCGC AGTACTACGC GTCGTTCCTG
ATCCTGTCGG GGCTGATGGT CGGCGTATTC GTCGCGCAGG ACGGGCTGCT GTTCTTCATC
TTCTTCGAGG CGACGCTGAT CCCGCTGTAC CTGCTGATCG GTACGTGGGG GCGCGAGCGA
CGCGTGTATG CGGCCGTGAA GTTCTTCTTC ATCTCGTTCG CCGGCTCGCT GTTGTTGCTG
ATGGCGATGC TGTACCTGTA CGCGCAGTCG CATACGTTCG ACATGGCCGT GTGGCGCACG
CTGCAGCTCG GCTTTGCGCC GCAGTTGCTG GTGTTCCTCG GCTTCTTCGC GGCGTTCGCG
GTCAAGGTGC CGATGTGGCC GGTCCACACG TGGCTGAGCG ACGTGTATAC GGACGGTCCG
ACGGGTGCCG CGCTGATGCT CGCGATGCTC AAGCTCGGCG GTTACGGGTT CCTGCGCTTC
GCGCTGCCGA TCACGCCGGA CGCGAGCCAC TTCTTCGCGC CGGCCGTGAT CGCGCTGTCG
CTGTTCGCGA TCGTCTACGC GAGCCTGATC GCGCTCGCGC AGACCGATCT CGGCAAGCTG
CTCGCGTATT CGACGGTCGC GCACATGGGG ATCGTCACGC TGGGGCTGTT CCTGTTCAAC
CGGATCGGCG TCGAAGGCGC GATCGTGCAA CTCGTGTCGT ACGGCTTCGT GGCGGGCGCG
ATGCTGTTGT GCGTGAACGT GCTCGTGGAT CGCACCAGGC AGCGCGAGAT TGCAGCGTAC
GGCGGCGTGG CGGGCGTGAT GCCGCGTTTC GCGACCTTCA CGCTGCTGTT CGCGATGGCC
AACGTCGGTC TGCCGGGCAC GTCGGGGTTC GTCGGCGAGT TCATGGTGAT CATGGGCGCG
ATCCGCTTCA ACTTCTGGAT CGGTGCGATC GCGGCGCTCA CGCTGATCCT CAGCGCGTCG
TACACGCTGT GGATGCTCAA GCGCGTCGTG TTCGGCAAGG TCGCGAGCCA GCGGATCGCG
AAGCTCGCCG ACCTGAATCG TCGCGAGATC GTGATGTTCG CGTCGCTCGC GCTGATCGTG
CTGGCGGTCG GCATCGATCC GAAGCCGTTC ACCGATGCGA TCGATCCGAC CGTCGGCAAG
CTGATCCAGG AAGCGAGCCA TTCGAAGGTG CCGGCAGGGG ATGGCCCCGC GCCGGCGCTG
CCGTCGTACA TGGCGTCGAC GCACGACTGA
 
Protein sequence
MHDFPFLSLA IWVPILFGAG LLRAGSDQHS RRIRLIALVG AIAGLAAVVP LIAGFDAHSA 
AMQFVERRDW LAAFNAGWRV GIDGASLWLV VLTAFTTLVV VVASWESVTV RVAQYYASFL
ILSGLMVGVF VAQDGLLFFI FFEATLIPLY LLIGTWGRER RVYAAVKFFF ISFAGSLLLL
MAMLYLYAQS HTFDMAVWRT LQLGFAPQLL VFLGFFAAFA VKVPMWPVHT WLSDVYTDGP
TGAALMLAML KLGGYGFLRF ALPITPDASH FFAPAVIALS LFAIVYASLI ALAQTDLGKL
LAYSTVAHMG IVTLGLFLFN RIGVEGAIVQ LVSYGFVAGA MLLCVNVLVD RTRQREIAAY
GGVAGVMPRF ATFTLLFAMA NVGLPGTSGF VGEFMVIMGA IRFNFWIGAI AALTLILSAS
YTLWMLKRVV FGKVASQRIA KLADLNRREI VMFASLALIV LAVGIDPKPF TDAIDPTVGK
LIQEASHSKV PAGDGPAPAL PSYMASTHD