Gene Bcen_5998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5998 
Symbol 
ID4096640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp581068 
End bp581823 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID638019278 
Producttetratricopeptide TPR_2 
Protein accessionYP_625836 
Protein GI107028741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGGA GTATAACATT CCGATTTACG CCTATGAAAC CTCATCGCGG CCGCGCGCCG 
AGCGCTGCGA CCCTCGTTGC GACCACCGTC ATGGGCGTCG CGCTGACGCT TTTCGCGGCT 
CCCGCGGCGC ATGCGCAAAA GGCCCCGGCG GTCGCCGACG GCACCCCCGA AATCGACGCG 
TCGATCGCCG GCAAGCAGTG GCAGCAGGCG CTCGCGCAGC TCGACGCGCG CATCGCGTCG 
AACCCGCACG ACGTGCAGGC GCAGTTCAAG CGCGGCACCG TGCTGGCCCG CCTGAACCGC 
GACGACGACG CGATCCAGCA GTTCGTCGCG ATCACGCAGG CGTACCCCGA ACTGCCCGAG 
CCGTACAACA ACCTCGCGGC GCTCTACGCG AAGCACGGCC GCTATGACGA GGCGCGCACC 
GCGCTCGTCA CCGCGACGCA ATCGAACCCG GGCTACTCGC TCGCGTACGA GAACCTCGGC 
GATCTCTACC TGCGCCTCGC GGCCGAGTCG TACAAGCGCG CGCAATCGCT CGGCCGCACG 
AGCGGCGCGA CCGCGCAGCG CCTCGCCGAT CTGCAGAAGA TCGTGTCGCC GTCGAAAGCC 
GCGCCGAACG CCCGCGCGAC GTCGCCGGCC ACGCGCGACT ACACCGACCG CGCCGCCGCG 
AACGTGAGCA CCACCACGCT GCCGATGTCG CCGACGTTCC AGTTCAGCGG TCCGTCGGGC 
GCACTGGCGG CGCCGTACGT CGCGCCGTCG CAATAA
 
Protein sequence
MARSITFRFT PMKPHRGRAP SAATLVATTV MGVALTLFAA PAAHAQKAPA VADGTPEIDA 
SIAGKQWQQA LAQLDARIAS NPHDVQAQFK RGTVLARLNR DDDAIQQFVA ITQAYPELPE 
PYNNLAALYA KHGRYDEART ALVTATQSNP GYSLAYENLG DLYLRLAAES YKRAQSLGRT 
SGATAQRLAD LQKIVSPSKA APNARATSPA TRDYTDRAAA NVSTTTLPMS PTFQFSGPSG 
ALAAPYVAPS Q