Gene Bcen_5982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5982 
Symbol 
ID4096605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp563950 
End bp564852 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID638019262 
Productdihydrodipicolinate synthase 
Protein accessionYP_625820 
Protein GI107028725 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.700449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACG GCACCCAAGA CGGCATTCAA ATCCGCGGCA GCATCCCCGC GATCGTCACC 
CCGATGCTCG AAGACGGCAG TCTCGACCTG CCGGCGTTTC GCAAACTGGT CGACTGGCAC
ATCGCGGAAG GCACCGATGC GCTCGTCGTC GTCGGTACGA GCGGCGAGTC GGCAACGCTC
AGCGTCGAAG AGCACATCCT GATGATCCGC ACGGCGGTCG AGCATGCGGC GAAACGCATC
CCGATCATCG CGGGCGCGGG CGGCAATTCG ACCGCCGAGG CGATCGAGCT GACGAAGCAC
GCGAAAGCCG TCGGCGCGGA CGCGACGCTG CAGGTCGTGC CGTACTACAA CAAGCCGACG
CAGGAAGGCA TGTACCGCCA CTTCCGGACG ATCGCCGAAG CGGTCGACCT GCCGGTGATC
CTGTACAACG TGCCGGGCCG GACGGTCGCG GACATGACGC ACGAGACGAC GCTGCGCCTC
GCGGAAGTCC CGGGCATCAT CGGCGTGAAG GAAGCGACCG GCAACATCGA TCGCGCCGCG
CACCTGATCA AGGCCGCACC GAAGCATTTC GCGATCTACA GCGGCGACGA TCCGACCGCG
ATCGCGCTGA TGCTGCTCGG CGGCCACGGC AACATCTCGG TGACCGCGAA CGTCGCGCCG
CGCGCGATGA GCGAGCTGTG CCGCGCGGCG CTGGCCGGCG ACGTGCAGAC GGCCCGCGCG
CTGCACATGA AGCTGCTGTC GCTGCACAAG AACCTGTTCA TCGAAGCGAA CCCGATCCCG
GTGAAGTGGG CGCTGCAGGC GATGGGCAAG ATGCAGGGCG GCATCCGGCT GCCGCTCACG
GCGCTCGACG AGCGCTGCCA CGATGCCGTG CGTTCGGCCC TCGTCGAGGC CGGCGTCCTC
TGA
 
Protein sequence
MANGTQDGIQ IRGSIPAIVT PMLEDGSLDL PAFRKLVDWH IAEGTDALVV VGTSGESATL 
SVEEHILMIR TAVEHAAKRI PIIAGAGGNS TAEAIELTKH AKAVGADATL QVVPYYNKPT
QEGMYRHFRT IAEAVDLPVI LYNVPGRTVA DMTHETTLRL AEVPGIIGVK EATGNIDRAA
HLIKAAPKHF AIYSGDDPTA IALMLLGGHG NISVTANVAP RAMSELCRAA LAGDVQTARA
LHMKLLSLHK NLFIEANPIP VKWALQAMGK MQGGIRLPLT ALDERCHDAV RSALVEAGVL