Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5965 |
Symbol | |
ID | 4097253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 546577 |
End bp | 547365 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638019245 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_625803 |
Protein GI | 107028708 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.439084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGATCG ACACGCACTG CCATCTCGAT GCCGCCGAGT TCGACGCCGA CCGCGACGCG GTCGCGCAGG CTGCACACGC GGCCGGCGTG TCGCGCATCG TGATCCCGAG CATCGGGCGC GACAACTTCA CGACGGTGCG CGAACTCGCG CAGCGCACGC CGGGCGCGGC GTACGCGCTC GGTATCCATC CGATGTATAC GCCGCAGGCG CGCGACGAGG ATCTCGACCG GCTGCGCATG GAGATCGAGG CAAGCCTCGA CGATCCGCGT TTCGTCGCGA TCGGCGAGAT CGGGCTCGAC TATTTCGTGC CGGGGCTCGA CGAAGACCGG CAGCAATTCT TCTACCAGGG CCAGCTCCGG CTGGCGCGGG AATTCGACCT GCCGGTGCTG TGTCACGTGC GCAAGTCGCA GGACCGCGTG CTGGCCGGGC TGCGCCGTTT CGGCGTGCGG CGCGGCATCG CGCATGCGTT CAACGGCAGT TTCCAGCAGG CCGAAGCGTA TCTGGCGCAG GGCCTCCATC TCGGCTTCGG CGGCAACGTG ACCTTCACGC GTGCGCGGCA GATCCGCCGG CTCGCCACCG AGTTGCCGCT CGACGCGCTC GTCGTCGAAA CCGACGCGCC CGACATCGCG CCCGAATGGG CATACAAATC CCGCAATACG CCCGACCAGG TGCCGCGCAT CGGCGCCGTG CTCGCCGAAT TGCGCGGGCT CGATACTGGC GAACTGGCCG TATGCACTTC GGCTAACGCG CTCGCCGCGC TGCCGCGACT CGCACTTTCG TCCGCATAA
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Protein sequence | MWIDTHCHLD AAEFDADRDA VAQAAHAAGV SRIVIPSIGR DNFTTVRELA QRTPGAAYAL GIHPMYTPQA RDEDLDRLRM EIEASLDDPR FVAIGEIGLD YFVPGLDEDR QQFFYQGQLR LAREFDLPVL CHVRKSQDRV LAGLRRFGVR RGIAHAFNGS FQQAEAYLAQ GLHLGFGGNV TFTRARQIRR LATELPLDAL VVETDAPDIA PEWAYKSRNT PDQVPRIGAV LAELRGLDTG ELAVCTSANA LAALPRLALS SA
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