| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5963 |
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| Symbol | |
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| ID | 4097251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | + |
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| Start bp | 544503 |
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| End bp | 545756 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638019243 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_625801 |
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| Protein GI | 107028706 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.28938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACTTC CGTACGAATG GCAGATCGGC TGGCGCTACA CGCGCGCCGG CAAACGCACG
ACCGGCAACG GCTTCATTTC CTTCATCGCG CTCGTCTCGA TGCTCGGGAT CGCGCTCGGC
GTCGCGGCGC TGATCGTCGT GCTGTCGGTG ATGAACGGCT TCCAGAAGGA AGTGCGCGAC
CGCATGCTGT CGGTGCTCGC GCACGTCGAG GTATTCTCGC CGACGGGGTC GATGCCCGAC
TGGCAACTGA CCGCGCAGGA AGCGCGCCGC AATCCGTCGG TGATCGGCGC CGCGCCGTAC
GTCGACGCGC AGGCGCTGCT CACGCGCCAG GACGCCGTGA GCGGCGTGAT GCTGCGCGGC
GTCGAGCCGT CGCTCGAGCC GCAGGTGTCC GACATCGGCA AGGACATGAA GGCCGGCCAG
CTCGGCGCGC TCGTGCCGGG CCAGTTCGGC ATCGTGCTCG GCGACGCGCT CGCCGGCAAC
CTCGGCGTGA CGGTCGGCGA CAAGGTCACG CTCGTCGCGC CCGAAGGCTC GATCACGCCG
GCCGGGATGA TGCCGCGCCT GAAGCAGTTC ACGGTGGTCG GCGTGTTCGA GTCGGGCCAC
TACGAATACG ACAGCACGCT CGCGATGATC AACATCCGCG ACGCCGAGGC GCTGTTCCGG
ATGAGCGCGC CGACCGGCGT GCGGCTGCGG CTCACCGATA TGCAGAAGGC GCCGCAAGTC
GCGGTCGAGC TGTCGCATAC GCTGTCGGGC AGCCTGTACA TTCGCGACTG GACCCAGCAG
AACAAGACGT GGTTCTCGGC CGTGCAGATC GAGAAGCGGA TGATGTTCAT CATCCTCACG
CTGATCATCG CGGTGGCCGC GTTCAACCTC GTGTCGTCGC TCGTGATGAC GGTGACCAAC
AAGCAGGCCG ACATCGCGAT CCTGCGCACG CTCGGCGCGC AGCCGGGGTC GATCATGAAG
ATCTTCGTCG TGCAGGGCGT GACGATCGGC TTCGTCGGCA CCGCGTCCGG CGTCGCGCTC
GGCTGCCTGA TCGCGTGGAG CATCCCGTGG CTGATCCCGA TGATCGAGCA CCTGTTCGGC
GTGCAGTTCC TGCCGCCGTC GGTGTATTTC ATCAGCGAGC TACCGTCCGA ACTCGTCGCG
AGCGACGTGA TCCGGATCGG GCTGATCGCG TTCGCGCTGT CGGCCGTCGC GACGCTTTAT
CCGAGCTGGC GCGGCGCGAA GGTGAAGCCG GCGGAGGCGC TCCGCTATGA ATGA
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| Protein sequence | MKLPYEWQIG WRYTRAGKRT TGNGFISFIA LVSMLGIALG VAALIVVLSV MNGFQKEVRD
RMLSVLAHVE VFSPTGSMPD WQLTAQEARR NPSVIGAAPY VDAQALLTRQ DAVSGVMLRG
VEPSLEPQVS DIGKDMKAGQ LGALVPGQFG IVLGDALAGN LGVTVGDKVT LVAPEGSITP
AGMMPRLKQF TVVGVFESGH YEYDSTLAMI NIRDAEALFR MSAPTGVRLR LTDMQKAPQV
AVELSHTLSG SLYIRDWTQQ NKTWFSAVQI EKRMMFIILT LIIAVAAFNL VSSLVMTVTN
KQADIAILRT LGAQPGSIMK IFVVQGVTIG FVGTASGVAL GCLIAWSIPW LIPMIEHLFG
VQFLPPSVYF ISELPSELVA SDVIRIGLIA FALSAVATLY PSWRGAKVKP AEALRYE
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