Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5961 |
Symbol | |
ID | 4097249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 541565 |
End bp | 543262 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638019241 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_625799 |
Protein GI | 107028704 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.987838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGGA TCGTTACCCG CCCCGTCGCG CCCGCCGACG CCGAAGCGCT TGCGCGCCAC GGTCTGCACC CCGTCCTCGC GCGCCTGTAC GCGTCGCGCG GCGTGCAGTC GCCCGTCGAC ATCGAGACCG CGCTCGCGCG CCTCGTGCCG CCCACCGAGC TGAAAGGCTG CGCCGATGCG GCGGTGCTGC TCGCCGACGC GATTGCCGAC AAGCGGCGCC TGCTGGTCGT CGCCGACTAC GACTGCGACG GCGCGACCGC CTGCGCGGTC GCGGTGCGCG GCCTGCGGAT GTTCGGCGCG CAGATCGACT ACCTGGTGCC GAACCGCTTC GAATACGGCT ACGGCCTCAC GCCCGAGATC GTCGAGCTCG CGGCCGCGCG CAAGCCCGAC CTGCTGATCA CCGTCGACAA CGGGATCGCG AGCGTCGCCG GCGTCGAAGC CGCGAACGCG CGCGGCATCG ACGTGCTCGT GACCGACCAC CACCTGCCCG GCGACGCGCT GCCCGCCGCG CGCGCGATCG TCAACCCGAA CCAGCCCGGC TGCGCATTCC CGAGCAAGCA CCTCGCCGGC GTCGGCGTGA TGTTCTACGT GCTGCTCGCG CTGCGCGCCG AGCTGCGCCG CCGCGGCGCG TTCGCGAGCA AGGAAGCCGA GCCGCGCCTC GACGGCCTGC TCGACCTCGT CGCGCTCGGC ACCGTCGCCG ACGTCGTGCG GCTCGACAGC AACAACCGCG TGCTGGTCGC GCAGGGGCTG CAGCGCATCC GCAACGGCCG CATGCAGCCG GGCATCGCCG CGCTGTTCCG CGCCGCCGCG CGCGAAGCGC GCACCGCGTC GGGCTTCGAC CTCGGCTTCG GCCTCGGCCC GCGCCTGAAC GCCGCCGGGC GGCTGTCCGA CATGTCGCTC GGCATCGAAT GCCTGATCAC CGACGACATC GGCCGCGCGT GGGATCTCGC GCAGCAGCTC GACGTGATGA ACCGCGAGCG CCGCGAAATC GAGGCCGGCA TGCAGCAGCA GGCGCTCGCC GATCTCGCCG ACGTCGACCC GGCCGACGCG TGCACGATCA CGCTGTTCAA TCCCGCGTGG CACCAGGGCG TGATCGGCAT CGTCGCCGGC CGGCTCAAGG AGAAATTCCA CCGTCCGTCG TTCACGTTCG CGCACGCCGA TGACGAAGGC CGACGGGTCA AAGGTTCCGG CCGATCGATC GCCGGCTTCC ACCTGCGCGA CGCGCTCGAC CTCGTGTCGA AGCGCGAACC GGACCTGATC GTCGCGTTCG GCGGCCACGC GATGGCGGCC GGCCTTACGC TCGACACCGA CAACGTGCCG CGCTTCGCGG CCGCGTTCGA GGCCGTCGCG CGCGAATGGC TGTCCGACGA CGCGCTGGCC CGCGTGATCG AGACCGACGG CGAACTCGAG GACGCGTACT TCACGCCGCA GTTCGTCGGC CTGCTCGACG AAGCCGTGTG GGGGCAAGGG TTTCCGGCCC CGCTTTTCTC GGGCGAATTC GACGTCGTGT CGCAGTCGCT CGTGAAGGAA AAGCACCTGA AGCTGCAGCT GGCGCGCGGC CGCCAGCGCT TCAACGCGAT CTGGTTCAAC CACACCGAGC CGCTGCCGGC GAGCGCGCTG GTCGCGTACC GGCTCGTCGC AGATACGTGG AACGGCGTCA CGCGCGTCCA GTTGATCGTC GAACACGCGG CCGGCTGA
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Protein sequence | MTRIVTRPVA PADAEALARH GLHPVLARLY ASRGVQSPVD IETALARLVP PTELKGCADA AVLLADAIAD KRRLLVVADY DCDGATACAV AVRGLRMFGA QIDYLVPNRF EYGYGLTPEI VELAAARKPD LLITVDNGIA SVAGVEAANA RGIDVLVTDH HLPGDALPAA RAIVNPNQPG CAFPSKHLAG VGVMFYVLLA LRAELRRRGA FASKEAEPRL DGLLDLVALG TVADVVRLDS NNRVLVAQGL QRIRNGRMQP GIAALFRAAA REARTASGFD LGFGLGPRLN AAGRLSDMSL GIECLITDDI GRAWDLAQQL DVMNRERREI EAGMQQQALA DLADVDPADA CTITLFNPAW HQGVIGIVAG RLKEKFHRPS FTFAHADDEG RRVKGSGRSI AGFHLRDALD LVSKREPDLI VAFGGHAMAA GLTLDTDNVP RFAAAFEAVA REWLSDDALA RVIETDGELE DAYFTPQFVG LLDEAVWGQG FPAPLFSGEF DVVSQSLVKE KHLKLQLARG RQRFNAIWFN HTEPLPASAL VAYRLVADTW NGVTRVQLIV EHAAG
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