Gene Bcen_5961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5961 
Symbol 
ID4097249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp541565 
End bp543262 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content71% 
IMG OID638019241 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_625799 
Protein GI107028704 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.987838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGGA TCGTTACCCG CCCCGTCGCG CCCGCCGACG CCGAAGCGCT TGCGCGCCAC 
GGTCTGCACC CCGTCCTCGC GCGCCTGTAC GCGTCGCGCG GCGTGCAGTC GCCCGTCGAC
ATCGAGACCG CGCTCGCGCG CCTCGTGCCG CCCACCGAGC TGAAAGGCTG CGCCGATGCG
GCGGTGCTGC TCGCCGACGC GATTGCCGAC AAGCGGCGCC TGCTGGTCGT CGCCGACTAC
GACTGCGACG GCGCGACCGC CTGCGCGGTC GCGGTGCGCG GCCTGCGGAT GTTCGGCGCG
CAGATCGACT ACCTGGTGCC GAACCGCTTC GAATACGGCT ACGGCCTCAC GCCCGAGATC
GTCGAGCTCG CGGCCGCGCG CAAGCCCGAC CTGCTGATCA CCGTCGACAA CGGGATCGCG
AGCGTCGCCG GCGTCGAAGC CGCGAACGCG CGCGGCATCG ACGTGCTCGT GACCGACCAC
CACCTGCCCG GCGACGCGCT GCCCGCCGCG CGCGCGATCG TCAACCCGAA CCAGCCCGGC
TGCGCATTCC CGAGCAAGCA CCTCGCCGGC GTCGGCGTGA TGTTCTACGT GCTGCTCGCG
CTGCGCGCCG AGCTGCGCCG CCGCGGCGCG TTCGCGAGCA AGGAAGCCGA GCCGCGCCTC
GACGGCCTGC TCGACCTCGT CGCGCTCGGC ACCGTCGCCG ACGTCGTGCG GCTCGACAGC
AACAACCGCG TGCTGGTCGC GCAGGGGCTG CAGCGCATCC GCAACGGCCG CATGCAGCCG
GGCATCGCCG CGCTGTTCCG CGCCGCCGCG CGCGAAGCGC GCACCGCGTC GGGCTTCGAC
CTCGGCTTCG GCCTCGGCCC GCGCCTGAAC GCCGCCGGGC GGCTGTCCGA CATGTCGCTC
GGCATCGAAT GCCTGATCAC CGACGACATC GGCCGCGCGT GGGATCTCGC GCAGCAGCTC
GACGTGATGA ACCGCGAGCG CCGCGAAATC GAGGCCGGCA TGCAGCAGCA GGCGCTCGCC
GATCTCGCCG ACGTCGACCC GGCCGACGCG TGCACGATCA CGCTGTTCAA TCCCGCGTGG
CACCAGGGCG TGATCGGCAT CGTCGCCGGC CGGCTCAAGG AGAAATTCCA CCGTCCGTCG
TTCACGTTCG CGCACGCCGA TGACGAAGGC CGACGGGTCA AAGGTTCCGG CCGATCGATC
GCCGGCTTCC ACCTGCGCGA CGCGCTCGAC CTCGTGTCGA AGCGCGAACC GGACCTGATC
GTCGCGTTCG GCGGCCACGC GATGGCGGCC GGCCTTACGC TCGACACCGA CAACGTGCCG
CGCTTCGCGG CCGCGTTCGA GGCCGTCGCG CGCGAATGGC TGTCCGACGA CGCGCTGGCC
CGCGTGATCG AGACCGACGG CGAACTCGAG GACGCGTACT TCACGCCGCA GTTCGTCGGC
CTGCTCGACG AAGCCGTGTG GGGGCAAGGG TTTCCGGCCC CGCTTTTCTC GGGCGAATTC
GACGTCGTGT CGCAGTCGCT CGTGAAGGAA AAGCACCTGA AGCTGCAGCT GGCGCGCGGC
CGCCAGCGCT TCAACGCGAT CTGGTTCAAC CACACCGAGC CGCTGCCGGC GAGCGCGCTG
GTCGCGTACC GGCTCGTCGC AGATACGTGG AACGGCGTCA CGCGCGTCCA GTTGATCGTC
GAACACGCGG CCGGCTGA
 
Protein sequence
MTRIVTRPVA PADAEALARH GLHPVLARLY ASRGVQSPVD IETALARLVP PTELKGCADA 
AVLLADAIAD KRRLLVVADY DCDGATACAV AVRGLRMFGA QIDYLVPNRF EYGYGLTPEI
VELAAARKPD LLITVDNGIA SVAGVEAANA RGIDVLVTDH HLPGDALPAA RAIVNPNQPG
CAFPSKHLAG VGVMFYVLLA LRAELRRRGA FASKEAEPRL DGLLDLVALG TVADVVRLDS
NNRVLVAQGL QRIRNGRMQP GIAALFRAAA REARTASGFD LGFGLGPRLN AAGRLSDMSL
GIECLITDDI GRAWDLAQQL DVMNRERREI EAGMQQQALA DLADVDPADA CTITLFNPAW
HQGVIGIVAG RLKEKFHRPS FTFAHADDEG RRVKGSGRSI AGFHLRDALD LVSKREPDLI
VAFGGHAMAA GLTLDTDNVP RFAAAFEAVA REWLSDDALA RVIETDGELE DAYFTPQFVG
LLDEAVWGQG FPAPLFSGEF DVVSQSLVKE KHLKLQLARG RQRFNAIWFN HTEPLPASAL
VAYRLVADTW NGVTRVQLIV EHAAG