Gene Bcen_5960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5960 
Symbol 
ID4097248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp540307 
End bp541482 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content63% 
IMG OID638019240 
Productpeptide chain release factor 2 
Protein accessionYP_625798 
Protein GI107028703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGTCACC GGGCAAGTTT GCCGATCAGC TATAATTCCG CTTTTTTACG AAGCCGGAAC 
AGCGAACGAT CATGGAAGCG GAACGTCTCA ACGCGATCGA AAGCTCCCTG CTCGACCTGC
GCAATCGCGC GGGCGAGCTT CGGGGGTATC TTTGACTACG ACGCCAAAGC TGCGCGTCTG
ACCGAAGTCA ACAAGGAACT CGAAGACCCG AACGTCTGGA ACGATTCGAA GAACGCCCAG
GCACTCGGCC GCGAGAAGAA GCTGCTCGAA GGCGTCGTCA CGACGCTCAC CGCGCTCGAT
AGCGACCTGC GCGATGCGCT CGACCTGTTC GAGCTGGCCC GCGAGGAAGG CGACGAAGAC
ACCCTTCTCG CATCCGAAGA CGACGCCGCG AAGCTCGAAG CGCGCGTCGG CGACATCGAA
TTCCGCCGGA TGTTCTCGAA CCCGGCCGAT CCGAACAATT GCTTCATCGA CATCCAGGCC
GGCGCCGGCG GCACCGAGGC ATGCGACTGG GCGTCGATGC TGCTGCGCCA GTACCTGCGC
TACTGCGAGC GCAAGGGCTT CAAGGCGGAA GTGCTCGAAG AGTCTGACGG CGACGTCGCC
GGCATCAAGA ACGCGACGGT CAAGGTCACG GGCGAATACG CGTACGGCTT CCTGCGCACC
GAAACGGGCA TCCACCGCCT CGTGCGCAAG TCGCCGTTCG ACTCGTCGGG CGGCCGCCAC
ACGTCGTTCT CGTCGGTGTT CGTCTATCCG GAAATCGACG ACTCGATCGA AGTCGAGATC
AACCCGGCCG ACCTGCGCAT CGACACGTAC CGCGCCTCGG GCGCGGGCGG CCAGCACATC
AACAAGACCG ACTCCGCGGT GCGGATCACG CACATGCCGA CGGGCATCGT CGTGCAGTGC
CAGAACGACC GCTCGCAGCA CCGCAACCGC GCCGAAGCGA TGGCGATGCT GAAATCGCGC
CTGTACGAAG TCGAAATGCG CAAGCGCCAG GCCGAGCAGG ACAAGCTCGA ATCGAGCAAG
ACCGATGTGG GCTGGGGCCA CCAGATCCGC TCGTACGTGC TCGACCAGAG CCGCGTGAAG
GACCTGCGCA CGAACGTCGA AATGAGCAAC ACGCGGGCGG TGCTCGACGG CGACCTCGAC
GACTTCATCA GCGCGAGCCT CAAACAGGGC GTGTAA
 
Protein sequence
MRHRASLPIS YNSAFLRSRN SERSWKRNVS TRSKAPCSTC AIARASFGGI FDYDAKAARL 
TEVNKELEDP NVWNDSKNAQ ALGREKKLLE GVVTTLTALD SDLRDALDLF ELAREEGDED
TLLASEDDAA KLEARVGDIE FRRMFSNPAD PNNCFIDIQA GAGGTEACDW ASMLLRQYLR
YCERKGFKAE VLEESDGDVA GIKNATVKVT GEYAYGFLRT ETGIHRLVRK SPFDSSGGRH
TSFSSVFVYP EIDDSIEVEI NPADLRIDTY RASGAGGQHI NKTDSAVRIT HMPTGIVVQC
QNDRSQHRNR AEAMAMLKSR LYEVEMRKRQ AEQDKLESSK TDVGWGHQIR SYVLDQSRVK
DLRTNVEMSN TRAVLDGDLD DFISASLKQG V