Gene Bcen_5950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5950 
Symbol 
ID4097200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp531581 
End bp532120 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID638019230 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_625788 
Protein GI107028693 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.13672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTCA CCACCAAAGG CCGTTTCGCC GTCACGGCGA TGATTGACTT GGCACTGCGC 
CAGGAGCAGG GCCCGGTGAC GCTTGCAGGC ATCAGCCAGC GCCAGCGGAT TTCGCTCTCG 
TATCTCGAAC AGCTGTTCGG CAAGCTGCGC AGGCATGAAA TCGTCGAATC CGTGCGCGGC 
CCGGGCGGCG GCTACAACCT CGCGCGTCGC GCGCAGGACG TCACCGTTGC CGACATCATC 
ATCGCGGTCG ATGAACCGCT CGACGCCACG CAGTGCGGCG GCAAAGGCAC GTGCGACGGC 
TCGAAGCAGC CCGACGGCCA TTGCATGACG CACGAGCTGT GGTCGACGCT GAACCAGAAG 
ATGGTCGAAT ACCTCGATTC GGTGTCGCTG CAGGATCTCG TCGATCAGCA GCGCGCACGC 
GAGGGTGCCC CCGCGGTGCT GCGCGACCGT CGCGCGCCGG AGCCCGTCGC CGCACCGGCC 
GAGCCCGTGC GCACGATGCC GCTCGACCCC AATTCGGTGT TCAACATCGC GAGTTCGTGA
 
Protein sequence
MRLTTKGRFA VTAMIDLALR QEQGPVTLAG ISQRQRISLS YLEQLFGKLR RHEIVESVRG 
PGGGYNLARR AQDVTVADII IAVDEPLDAT QCGGKGTCDG SKQPDGHCMT HELWSTLNQK 
MVEYLDSVSL QDLVDQQRAR EGAPAVLRDR RAPEPVAAPA EPVRTMPLDP NSVFNIASS