| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5942 |
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| Symbol | |
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| ID | 4097192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | + |
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| Start bp | 522895 |
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| End bp | 524661 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638019222 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_625780 |
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| Protein GI | 107028685 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00253524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTCA TCGAAGTCAA GGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC
GAAGTCAACG TCAAACCCGG CGACGTGATC GAAAAAGAGC AAACGCTCAT CACGCTCGAA
TCCGACAAAG CCTCCATGGA AGTGCCCAGC GACGTCGCCG GCACCGTCAA GGAAGTCAAG
GTCAAAGCCG GCGAGAAAGT CTCGCAAGGC ACCGTCATCG CCATCGTCGA AGCCTCGGCA
GGCGCAGCCG CGCCCGCGAA AGAGCCCGAA GCGCCGAAGC CCGCAGCCGC CGCACCGGCT
CCGGCCGCCG CCGCGCCGGC GCCCGTGCCG CAAGCCGGCA GCTACAGCGG CGCCGCCGAC
ATCGAGTGCG ACATGCTCGT GCTCGGCGCC GGCCCCGGTG GCTACTCGGC CGCGTTCCGC
GCCGCCGACC TCGGCATGAA GACCGTACTC GTCGAACGCT ATTCGACGCT CGGCGGCGTC
TGCCTGAACG TCGGTTGCAT CCCGTCGAAG GCGCTGCTGC ATACGTCGCT CGTCGTCGAG
GAAGCCGCGG CGCTCGCGTC GCACGGCATC ACGTTCGGCA AGCCGCAGGT CGATCTCGAC
AAGCTGCGCG ACTTCAAGGG CGGCGTCGTC AAGAAACTGA CGACGGGCCT CGCCGGCATG
GCGAAGGCAC GCAAGGTCGA AGTGGTCACC GGCGTCGGCG CGTTCGTCGA TCCGTTCCAC
ATGGAAGTGC AGGGCGAAAA CGGCAAGAAA GTCGTCAAGT TCAAGCAGGC CATCATCGCC
GCCGGCTCGC AGGCCGTGAA GCTGCCGTTC ATGCCGGAAG ACCCGCGCGT CGTCGATTCG
ACGGGCGCGC TCGAACTGCG CCAGTTGCCC AAGCGCATGC TCGTGATCGG CGGCGGCATC
ATCGGCCTCG AAATGGCCAC GGTGTACTCG ACGCTCGGCG CCGAGATCGA CGTCGTCGAA
ATGATGGACG GCCTGATGAT GGGCGCCGAC CGCGATCTCG TGAAGGTCTG GGAAAAGTAC
AACGCGAAGC GCTTCGGCAA CGTGATGCTG AAGACCAAGA CGGTCGGCGC GGAAGCGAAG
GAAGACGGCA TCTACGTGAA GTTCGAGGGC GAGAAGGCGC CGGCGGAAGC GCAGCGCTAC
GACCTCGTGC TCGTCGCGGT GGGCCGCAGC CCGAACGGCA AGAAGATCGG TGCCGACAAG
GCCGGCGTCG CGGTCACCGA CCGCGGCTTC ATCGACGTCG ACAAGCAGAT GCGCACGAAC
GTGCCGCACA TCTTCGCGAT CGGCGATATC GTCGGCCAGC CGATGCTCGC GCACAAGGCC
GTGCATGAAG GCCACGTCGC AGCGGAAGCC GCGCATGGCG AGAAGGCGTA CTTCGACGCG
CTGCAGATCC CGTCGGTGGC CTACACCGAT CCGGAAGTGG CGTGGGCCGG CAAGACCGAA
GACCAGTGCA AGGCCGAAGG CATCAAGTAC GGCAAGGCCG TGTTCCCGTG GGCCGCTTCG
GGCCGCGCGA TCGCGAACGG CCGCGACGAA GGCTTTACGA AGCTGATCTT CGACGAGGAA
ACCCATCGCG TGATCGGCGG CGCGATCGTC GGCCTGAACG CGGGCGACCT GATCAGCGAA
GTGTGCCTCG CGGTCGAGAT GGGCGCGGAC GCGGAAGACA TCGGCAAGAC GATCCATCCG
CACCCGACGC TCGGCGAATC GGTCGGCATG GCCGCCGAGC TGTACGAAGG CGTCTGCACG
GACCTGCCGC CGCAGCGCAA GAAGTAA
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| Protein sequence | MSLIEVKVPD IGDFSGVDVI EVNVKPGDVI EKEQTLITLE SDKASMEVPS DVAGTVKEVK
VKAGEKVSQG TVIAIVEASA GAAAPAKEPE APKPAAAAPA PAAAAPAPVP QAGSYSGAAD
IECDMLVLGA GPGGYSAAFR AADLGMKTVL VERYSTLGGV CLNVGCIPSK ALLHTSLVVE
EAAALASHGI TFGKPQVDLD KLRDFKGGVV KKLTTGLAGM AKARKVEVVT GVGAFVDPFH
MEVQGENGKK VVKFKQAIIA AGSQAVKLPF MPEDPRVVDS TGALELRQLP KRMLVIGGGI
IGLEMATVYS TLGAEIDVVE MMDGLMMGAD RDLVKVWEKY NAKRFGNVML KTKTVGAEAK
EDGIYVKFEG EKAPAEAQRY DLVLVAVGRS PNGKKIGADK AGVAVTDRGF IDVDKQMRTN
VPHIFAIGDI VGQPMLAHKA VHEGHVAAEA AHGEKAYFDA LQIPSVAYTD PEVAWAGKTE
DQCKAEGIKY GKAVFPWAAS GRAIANGRDE GFTKLIFDEE THRVIGGAIV GLNAGDLISE
VCLAVEMGAD AEDIGKTIHP HPTLGESVGM AAELYEGVCT DLPPQRKK
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