Gene Bcen_5934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5934 
Symbol 
ID4096711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp509171 
End bp509863 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID638019214 
Productaspartate racemase 
Protein accessionYP_625772 
Protein GI107028677 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1794] Aspartate racemase 
TIGRFAM ID[TIGR00035] aspartate racemase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.137693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGA TCGGACTGAT CGGCGGCATG AGCTGGGAAT CGTCGGCCGA GTACTACCGG 
ATGATCAACC GGCACTCGAA GGCATTGCAC GGCGGCCATC ACAACGCAAA GAGCGTGCTG 
GTCACGGTCG ACTTCGCCGA AATCGAAGCG CTGCAGCGCA TGCACGACTG GGCCGCGCTC 
GGCGAACGGA TGGCCGACGC GGCGCGGCGG CTCGAAGCGG CCGGCGCCGA TCTCGTCGTC 
CTGACGACCA ATACGATGCA TCGCGTGCAC GACGCGATCG AGGCCGCGGT GACGCTGCCG 
TTCCTGCATA TCGCCGATCC GACCGGCAGC GCGCTGCGCG CCGCGGGCGT CGAGCGCGTC 
GCGCTGCTCG GTACGCGCTA CACGATGGAA CTGCCGTTCT ATGCGGCGCG GCTGCGCGAG 
AAGTTCGGGC TCGACGTGCT GGTGCCGGAC GAACGCGGGC GCGACGACGT GCACCGGATC 
ATCTACGACG AGCTGTGCCA CGGTGTCATC TCGGAGGAAT CGCGCGCCAC GTACGTGTCG 
ATCATCGATG GACTGGCTCA GCGCGGCGCG CAGGCCGTGA TCCTCGGCTG CACGGAAATC 
ACGCTGCTGA TCGGTGCGGA CGACTCGCCG CTGCCGGTAT TCGATACGAC CGCGCTGCAT 
GCGAAAGCAG CCGTCGAGTG GGCGGCGTGC TGA
 
Protein sequence
MKTIGLIGGM SWESSAEYYR MINRHSKALH GGHHNAKSVL VTVDFAEIEA LQRMHDWAAL 
GERMADAARR LEAAGADLVV LTTNTMHRVH DAIEAAVTLP FLHIADPTGS ALRAAGVERV 
ALLGTRYTME LPFYAARLRE KFGLDVLVPD ERGRDDVHRI IYDELCHGVI SEESRATYVS 
IIDGLAQRGA QAVILGCTEI TLLIGADDSP LPVFDTTALH AKAAVEWAAC