| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5876 |
|---|
| Symbol | |
|---|
| ID | 4096937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | + |
|---|
| Start bp | 438647 |
|---|
| End bp | 439621 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638019153 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_625714 |
|---|
| Protein GI | 107028619 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCG ATGCACATAA CCTGAACGAC CTGATGTACT TCTCGCAGGT CGTCGAACAT
GGCGGCTTCT CGGCCGCCGA GCGCGTGCTG GGCATCTCGA AATCGCGTCT GTCGCGACGC
CTGACCGAGC TCGAGGCGGC GCTCGGCGTG CGCCTGCTGC AGCGTTCGAC GCGCAAGCTC
GCGCTGACCG AGGCGGGGGA GTTGTTCTAC CAGCATTGCC AGGCGATGCT CGCCGAAGCG
CAGGCCGCGA TGAACGCGGT GCAGCAGTTG CGCGCGTCGC CACGCGGCTC GGTGCGCGTC
AGCGTGCCGG TGACGCTGTC GCAGACGATG CTGTCGCGCA TCCTGCCCGA ATTCCTGCGC
CGCTATCCCG AGGTGAAGGT GCATGTCCGC GTGACGAATC GCGTGATCGA CCTGTTCGAG
GATTCGATCG ACGTCGCGTT GCGCGTGCGC TCCGAGCCGC CGCAGAACGC CAACATCGTC
GTGCGGCCGC TGTGGCGCAC CGAGCAGATG CTGGTGGGCG CGCCGAGCCT GCTGAGCCAG
AATGCGCCGC CGCTGGCGCC GGACGACCTG ACCGGCTTCG AGACGCTCGA TACGCCGAGC
GTCGACGGCC GGCACGTATT CAACCTGATC GCGCCGGATG GAACGCGCCA CGTGCACGAG
CATGATCCGC GGCTCGTGAC GGCCGACCTG ATGACGATCC GCGAGGCCGT GCTCGATGGC
CTCGGCATCG CCGCGCTGCC GGAGATGATG TACGGCAACG CGCTGCGCGC GGGGCAACTG
TCGCCCGTGA TGCCGGGCTG GACGCTGCCG GTGCCGCAGC TGTACGCGGT GTTCGTGTCG
CGGCAGGGGA TGCCGCCCGC GGTCCGTGCG TTCGTCGATT ACCTGGTCGA GAAGCTCGAC
CATGGCGCGT ACAAGGAGCC GGGTTGCCCC GAGCGCGCGA AGCAGGAAGC GGTGGCCGAT
GTTTCGGCGA CCTGA
|
|---|
| Protein sequence | MNIDAHNLND LMYFSQVVEH GGFSAAERVL GISKSRLSRR LTELEAALGV RLLQRSTRKL
ALTEAGELFY QHCQAMLAEA QAAMNAVQQL RASPRGSVRV SVPVTLSQTM LSRILPEFLR
RYPEVKVHVR VTNRVIDLFE DSIDVALRVR SEPPQNANIV VRPLWRTEQM LVGAPSLLSQ
NAPPLAPDDL TGFETLDTPS VDGRHVFNLI APDGTRHVHE HDPRLVTADL MTIREAVLDG
LGIAALPEMM YGNALRAGQL SPVMPGWTLP VPQLYAVFVS RQGMPPAVRA FVDYLVEKLD
HGAYKEPGCP ERAKQEAVAD VSAT
|
|---|
| |