Gene Bcen_5872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5872 
Symbol 
ID4096933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp435404 
End bp436429 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID638019149 
Producttransposase IS116/IS110/IS902 
Protein accessionYP_625710 
Protein GI107028615 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACGG TATCGCTGAT CGGAGTCGAT CTCGGCAAGC ACTGCTTCCA CCTGCATGGG 
CAGGATGCGT CAGGCAGGAT GGTGTTCCGT AAGAAGCTCA CGCGTAGCCA GATGTTCACG
CTGCTGGGCA ATTTCCCGAG TTGTACGGTG GTCATGGAGG CCTGCGCCGG TGCGCACTGG
ATCGCCCGCC GACTTCAGGC GCTGGGCCAC GAGGCCAAGC TGATTTCCCC TCAGTTCGTC
AAACCGTTCC GGCAAGGCAA CAAGAACGAT TTCGCGGATG CCCAGGCGAT CTGCGAAGCT
GCTTCACGAC CGAGCATGCG TTTCGTGAGC CCGCACAACG AAGCTCAGCA GATCGTTTCA
GCCTTGCATC GCGTGCGCGG GGGGCTGGTG CGCGAGCGCA CCGGCACGAT CAACCAAATT
CATGCGTTTC TGTTGGAATT CGGCATCAGC TTGCCGCGCG GCATGGCGGT GATCCGGCGA
CTGCCCGCCG TGCTGGAGGC AGAATCGTTG CCGCCGCGGC TGGTAAGCGT GATCGAACGT
CTGCACGCGC ACTGCAAGTA TCTGGACGAG CAGATCCATC AGCTCGAACG TGAGTTGCTT
ACCCAGCTAC ACGAGGACGA ACGCAGCGAG CGGCTGCTCG AGATTCCCGG CATTGGCCCG
ATGACCGCCA GCGTGTTGAT GTCGGAGTTG GGCGATGCGC GCCAATATGG TTCGGCAAGG
CAGTTTGCGG CGTCGGTCGG GCTGGTGCCG CGGCAGTACA GCACCGGCGG CAAACCAACG
CTCCTCGGCA TCAGCAAGCG CGGGGACAAG GAATTGCGGC GGCTGCTGGT GCAATGTGCG
CGGACCATCA TGCAGCGCAT CGAGCACCGC ACGGATGCAT TGGGCGTCTG GATTCGCGGC
CTGTTGGCGC GACGACATTC GAACGTAGTG GCTTGCGCGT TGGCCAATAA ATTGGCGAGG
ATCGCGTGGG CCATCCTCGC CAAAGGGACA CACTACCGAA GCACCGAGGC TGTTCCCGCG
GTCTGA
 
Protein sequence
MDTVSLIGVD LGKHCFHLHG QDASGRMVFR KKLTRSQMFT LLGNFPSCTV VMEACAGAHW 
IARRLQALGH EAKLISPQFV KPFRQGNKND FADAQAICEA ASRPSMRFVS PHNEAQQIVS
ALHRVRGGLV RERTGTINQI HAFLLEFGIS LPRGMAVIRR LPAVLEAESL PPRLVSVIER
LHAHCKYLDE QIHQLERELL TQLHEDERSE RLLEIPGIGP MTASVLMSEL GDARQYGSAR
QFAASVGLVP RQYSTGGKPT LLGISKRGDK ELRRLLVQCA RTIMQRIEHR TDALGVWIRG
LLARRHSNVV ACALANKLAR IAWAILAKGT HYRSTEAVPA V