Gene Bcen_5867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5867 
Symbol 
ID4096928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp429465 
End bp431588 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content65% 
IMG OID638019144 
Productexcinuclease ABC subunit B 
Protein accessionYP_625705 
Protein GI107028610 
COG category[L] Replication, recombination and repair 
COG ID[COG0556] Helicase subunit of the DNA excision repair complex 
TIGRFAM ID[TIGR00631] excinuclease ABC, B subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCTT TGCCCTTGCT CCGGCCGCAT TCCATGTCCG AACATCATGC CGAAGTCGGC 
GACGCGCTCG ACGAATCCAA ATTCGTCACT TTCGAAGGGT CGCCGTTCCA GCTTTACCAG
CCCTATCCGC CCGCGGGCGA CCAGCCGACC GCGATCGATA CGCTCGTCGA AGGCGTCGGC
GACGGCCTTG CCTTCCAGAC GCTGCTCGGC GTAACCGGTT CGGGCAAGAC CTTCACGATG
GCCAACACGA TCGCGCGGCT CGGCCGCCCG GCGATCGTGT TCGCGCCGAA CAAGACGCTC
GCGGCCCAGC TTTACGCGGA GTTTCGCGAG TTCTTCCCGC GCAACGCGGT CGAGTATTTC
GTGTCGTACT ACGACTACTA CCAGCCTGAG GCCTACGTGC CGCAGCGCGA CCTGTTCATC
GAGAAGGATT CGTCGATCAA CGAGCACATC GAGCAGATGC GGCTGTCGGC GACGAAGAGC
CTGATGGAGC GTCGCGACGT GGTGATCGTC GCGACGGTGT CGGCGATCTA CGGTATCGGC
AATCCGTCCG AATACCACCA GATGATCCTG ACGCTGCGCG CCGGCGACAA GCTCGGCCAG
CGCGACGTGA TCGCGCGATT GATCGCGATG CAATACACGC GCAACGAGCA GGACTTCCAG
CGCGGCACGT TCCGCGTGCG CGGCGACACG ATCGACATCT TCCCGGCCGA ACACGCGGAA
ATGGCCGTGC GCGTCGAGCT GTTCGACGAC GAAGTCGAGA CGCTGCAGCT GTTCGACCCG
CTGACCGGGC GCGTGCGGCA GAAGATTCCG CGTTTCACCG TGTACCCGTC GTCGCACTAC
GTGACGCCGC GCGATACCGT GATGCGCGCG GTCGAGACGA TCAAGGACGA ACTGCGCGAA
CGGCTCGAGT TCTTCCATCG CGACGGCAAG CTCGTCGAGG CGCAGCGCCT CGAGCAGCGC
ACGCGCTTCG ATCTCGAAAT GCTGCAGGAG CTCGGCTTCT GCAAGGGCAT CGAGAACTAT
TCGCGGCATT TCTCGGGCGC GGCGCCCGGC GATCCGCCGC CGACGCTCGT CGACTACCTG
CCGCCCGACG CGCTGATGCT GCTCGACGAA TCGCACGTGC TGATCGGCCA GCTGAACGGC
ATGTACAACG GTGACCGCGC GCGCAAGGAA AACCTCGTCA ATTACGGGTT CCGCCTGCCG
TCGGCGCTCG ACAACCGGCC GCTGAAGTTC CCCGAGTTCG AGCGCAAGAT GCGCCAGGTC
GTGTTCGTGT CGGCCACGCC GGCCGACTAC GAGAAGCGCG TGACGGGGCA GATCGCCGAG
CAGGTCGTGC GACCGACCGG CCTCGTCGAT CCGGAAATCG AAGTGCGCCC GGCGAGCTCG
CAGGTCGACG ACGTGCTGAC CGAGATCAAC GCGCGCGTGA AGGCCGGCGA GCGCGTGCTG
ATCACCGTGC TGACGAAGCG CATGGCCGAA CAGCTGACCG AGTTCCTGGC CGATCATGGC
GTCAAGGTGC GTTACCTGCA CAGCGACATC GATACGGTCG AGCGCGTCGA GATCATCCGC
GACCTGCGGC TCGGCACGTT CGACGTGCTG GTCGGGATCA ACCTGCTGCG CGAGGGCCTC
GACATTCCCG AAGTGTCGCT CGTCGCGATC CTCGACGCGG ACAAGGAAGG CTTCCTGCGC
GCCGAGCGCT CGCTGATCCA GACGATCGGC CGCGCCGCGC GGAACGTGAA CGGCAAGGCG
ATCCTCTACG CGGACAACAT GACCGAGTCG ATGAAGCGCG CGATCGGCGA AACCGAGCGG
CGCCGCGCGA AGCAGATCGC CTACAACGAA AAGATGGGCA TCACGCCGCG CGGCGTCGTG
AAGCGCATCA AGGACATCAT CGACGGTGTC TACAACGCCG ACGACGTGCG TGCGGAGCTG
AAGGAGGCGC AACAGCGCGC GAAATTCGAG GACATGTCGG AAAAGCAGCT CGCGAAGGAA
ATCAAGCGTC TCGAGAAGCA AATGGCCGAC TACGCGAAGA ACCTCGAATT CGAGAAGGCC
GCCGCAACCC GCGACCAGCT TGCCGTGCTG CGCGAACGCG TGTTCGGCGC GAACGTCGGC
GACCACATCA GCGGCGGCCG GTAA
 
Protein sequence
MLSLPLLRPH SMSEHHAEVG DALDESKFVT FEGSPFQLYQ PYPPAGDQPT AIDTLVEGVG 
DGLAFQTLLG VTGSGKTFTM ANTIARLGRP AIVFAPNKTL AAQLYAEFRE FFPRNAVEYF
VSYYDYYQPE AYVPQRDLFI EKDSSINEHI EQMRLSATKS LMERRDVVIV ATVSAIYGIG
NPSEYHQMIL TLRAGDKLGQ RDVIARLIAM QYTRNEQDFQ RGTFRVRGDT IDIFPAEHAE
MAVRVELFDD EVETLQLFDP LTGRVRQKIP RFTVYPSSHY VTPRDTVMRA VETIKDELRE
RLEFFHRDGK LVEAQRLEQR TRFDLEMLQE LGFCKGIENY SRHFSGAAPG DPPPTLVDYL
PPDALMLLDE SHVLIGQLNG MYNGDRARKE NLVNYGFRLP SALDNRPLKF PEFERKMRQV
VFVSATPADY EKRVTGQIAE QVVRPTGLVD PEIEVRPASS QVDDVLTEIN ARVKAGERVL
ITVLTKRMAE QLTEFLADHG VKVRYLHSDI DTVERVEIIR DLRLGTFDVL VGINLLREGL
DIPEVSLVAI LDADKEGFLR AERSLIQTIG RAARNVNGKA ILYADNMTES MKRAIGETER
RRAKQIAYNE KMGITPRGVV KRIKDIIDGV YNADDVRAEL KEAQQRAKFE DMSEKQLAKE
IKRLEKQMAD YAKNLEFEKA AATRDQLAVL RERVFGANVG DHISGGR