Gene Bcen_5848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5848 
Symbol 
ID4096573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp402820 
End bp403332 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content63% 
IMG OID638019120 
Productsmall integral membrane protein 
Protein accessionYP_625686 
Protein GI107028591 
COG category[S] Function unknown 
COG ID[COG5472] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.347749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTC GTCTTTCCAA GGCAGCCATG GTGCTGGCCA TGGCCTTTTT CGCGTCGCTC 
GTCGCGTTCG GCAACATCAC CGACTACGCG ACGAATTTCG CGTTCGTGCA CCACGTGTTC
CTGATGGATA CCACCTTCCC CGCCAACGGA ATCATGTATC GCGCGATCGG CACGACGTGG
GTTCATCACG CCGGCTATAT CGGCATCATT TCGATGGAAA CGCTGACGGC CGTGCTGTGC
TGGATCGGCG GCGCCCGGCT GCTGCGCGCA CGGCGCGCCG GCGATGCGGC ATTCCGCGCG
GCCAAGGGCC ATGCGATCGC CGGCCTGACG CTCGGCTTCC TGACGTGGCA GGTCGCGTTC
ATGTCGGTCG GCGGCGAATG GTTCGGGATG TGGATGTCGA AGCAATGGAA CGGCGTGCCG
GACGCGTTCC GGTTCTTCAT CACGCTGCTG CTCGTGCTCG TCTACCTGAC GATGAATAAC
GACGGCGTCG ACGACACGCG TACCGCGCAC TGA
 
Protein sequence
MIIRLSKAAM VLAMAFFASL VAFGNITDYA TNFAFVHHVF LMDTTFPANG IMYRAIGTTW 
VHHAGYIGII SMETLTAVLC WIGGARLLRA RRAGDAAFRA AKGHAIAGLT LGFLTWQVAF
MSVGGEWFGM WMSKQWNGVP DAFRFFITLL LVLVYLTMNN DGVDDTRTAH